RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 NBEAL1Q6ZS30 2694 aa11.33□□□□□ -0.59
CTSA-213ENST00000606782 NGFP01138 241 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 IGHV1-46P01743 117 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 CCNOP22674 350 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 MYF6P23409 242 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 GCH1P30793 250 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 MPV17P39210 176 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 ENTPD1P49961 510 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 ZNF81P51508 661 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 RPS7P62081 194 aaKnown RBP11.33□□□□□ -0.6
CTSA-213ENST00000606782 PPP1CBP62140 327 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 IL5RAQ01344 420 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 AQP6Q13520 282 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 LCN1P1Q5VSP4 162 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 LAIR2Q6ISS4 152 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 SLC18B1Q6NT16 456 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 ZNF774Q6NX45 483 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 RFPL4BQ6ZWI9 263 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 GJC3Q8NFK1 279 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 OR51F2Q8NH61 342 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 SLC25A40Q8TBP6 338 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 IPCEF1Q8WWN9 437 aaPredicted RBP11.33□□□□□ -0.6
CTSA-213ENST00000606782 GTF3AQ92664 365 aaKnown RBP11.33□□□□□ -0.6
CTSA-213ENST00000606782 ELMOD3Q96FG2 381 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 C4orf45Q96LM5 186 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 INTS14Q96SY0 518 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 ZNF184Q99676 751 aaPredicted RBP11.33□□□□□ -0.6
CTSA-213ENST00000606782 CDADC1Q9BWV3 514 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 ANKRD60Q9BZ19 345 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 OR2J1Q9GZK6 312 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 ELOVL3Q9HB03 270 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 CYSLTR2Q9NS75 346 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 DECR2Q9NUI1 292 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 TBCCD1Q9NVR7 557 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 MRPS18AQ9NVS2 196 aaKnown RBP11.33□□□□□ -0.6
CTSA-213ENST00000606782 HIF1ANQ9NWT6 349 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.33□□□□□ -0.6
CTSA-213ENST00000606782 COMMD3-BMI1R4GMX3 469 aa11.33□□□□□ -0.6
CTSA-213ENST00000606782 A0A0A6YYJ9 748 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 TRAV20A0A0B4J274 112 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 SNTNA6NMZ2 147 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 DENRO43583 198 aaKnown RBP11.32□□□□□ -0.6
CTSA-213ENST00000606782 TCF21O43680 179 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 CDC14BO60729 498 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 CD55P08174 381 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 SBK2P0C263 348 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 PSKH1P11801 424 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 SRP14P37108 136 aaKnown RBP11.32□□□□□ -0.6
CTSA-213ENST00000606782 CCDC92Q53HC0 331 aaPredicted RBP11.32□□□□□ -0.6
CTSA-213ENST00000606782 SHFQ7M4L6 423 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 SLC16A9Q7RTY1 509 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 DPY19L4Q7Z388 723 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.32□□□□□ -0.6
CTSA-213ENST00000606782 ERI1Q8IV48 349 aaKnown RBP11.32□□□□□ -0.6
CTSA-213ENST00000606782 YIPF3Q9GZM5 350 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 SAP30LQ9HAJ7 183 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 ADGRL4Q9HBW9 690 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 G6PC2Q9NQR9 355 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 ASH2LQ9UBL3 628 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 ZDHHC8Q9ULC8 765 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 EXOGQ9Y2C4 368 aaKnown RBP11.32□□□□□ -0.6
CTSA-213ENST00000606782 GRIP1Q9Y3R0 1128 aa11.32□□□□□ -0.6
CTSA-213ENST00000606782 PLSCR5A0PG75 271 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 ZSCAN5BA6NJL1 495 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 CLDN25C9JDP6 229 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 J3QRE1 110 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 RER1O15258 196 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 SELENOFO60613 162 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 ALOX5APP20292 161 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 RPS27P42677 84 aaKnown RBP11.31□□□□□ -0.6
CTSA-213ENST00000606782 SLC15A1P46059 708 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 MTNR1AP48039 350 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 HCCSP53701 268 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 CXCR4P61073 352 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 SRSF2Q01130 221 aaKnown RBP11.31□□□□□ -0.6
CTSA-213ENST00000606782 SCRN3Q0VDG4 424 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 SMN1Q16637 294 aaKnown RBP11.31□□□□□ -0.6
CTSA-213ENST00000606782 RSPO1Q2MKA7 263 aaPredicted RBP11.31□□□□□ -0.6
CTSA-213ENST00000606782 HFEQ30201 348 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 SPATA46Q5T0L3 261 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 CORO6Q6QEF8 472 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 ARL9Q6T311 187 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 LINC00346Q8IVM7 164 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 ZNF454Q8N9F8 522 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 OR2AJ1Q8NGZ0 328 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 OTOSQ8NHW6 89 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 ABHD4Q8TB40 342 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 CNIH3Q8TBE1 160 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 RAB39BQ96DA2 213 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 MAP6Q96JE9 813 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 DIRC2Q96SL1 478 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 NARFLQ9H6Q4 476 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 ZNF665Q9H7R5 613 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 PNRC2Q9NPJ4 139 aaKnown RBP11.31□□□□□ -0.6
CTSA-213ENST00000606782 PLCXD1Q9NUJ7 323 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 METRNQ9UJH8 293 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 RPL36Q9Y3U8 105 aaKnown RBP11.31□□□□□ -0.6
CTSA-213ENST00000606782 WIPI2Q9Y4P8 454 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 LRRC42Q9Y546 428 aa11.31□□□□□ -0.6
CTSA-213ENST00000606782 ANK2Q01484 3957 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms