RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	SEMA6A	Q9H2E6	1030 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SP140L	Q9H930	580 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	GCM1	Q9NP62	436 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	TMEM106B	Q9NUM4	274 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	LPAR3	Q9UBY5	353 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ENOPH1	Q9UHY7	261 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	PPP1R3C	Q9UQK1	317 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	2e-7	■■■□□ 15.2
ARHGEF1-222	ENST00000600517	CD300LB	A8K4G0	201 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	IFNL4	K9M1U5	179 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	PRKY	O43930	277 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	LYN	P07948	512 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SLC2A1	P11166	492 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ALOX5AP	P20292	161 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SRP9	P49458	86 aa	Known RBP	11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	DVL1P1	P54792	670 aa	Predicted RBP	11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	PRSS12	P56730	875 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	RPS7	P62081	194 aa	Known RBP	11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	APOF	Q13790	326 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	KPNB1	Q14974	876 aa	Known RBP	11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	FAM120AOS	Q5T036	256 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	C12orf73	Q69YU5	71 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	PRSS45	Q7RTY3	260 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	C10orf67	Q8IYJ2	551 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	OR10AD1	Q8NGE0	317 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	OR2AE1	Q8NHA4	323 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SPSB4	Q96A44	273 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SGK3	Q96BR1	496 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	MEGF10	Q96KG7	1140 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	CIB1	Q99828	191 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	PRRG3	Q9BZD7	231 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	YIPF3	Q9GZM5	350 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SHARPIN	Q9H0F6	387 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ZNF665	Q9H7R5	613 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	DCAF16	Q9NXF7	216 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	OAZ3	Q9UMX2	235 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	N6AMT1	Q9Y5N5	214 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	NPTN	Q9Y639	398 aa		11.37	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	GGT3P	A6NGU5	568 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517		F5H5P2	479 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517		H3BNX3	289 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	XRCC2	O43543	280 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	IGHV2-5	P01817	119 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	HLA-DPB1	P04440	258 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	MSMB	P08118	114 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	H2BFM	P0C1H6	154 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	FAM157C	P0CG43	387 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ANPEP	P15144	967 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	HSD11B1	P28845	292 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	CX3CR1	P49238	355 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	MAB21L1	Q13394	359 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	CR1L	Q2VPA4	569 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	AADACL4	Q5VUY2	407 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ZFP1	Q6P2D0	407 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	MEPCE	Q7L2J0	689 aa	Known RBP	11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SLC16A9	Q7RTY1	509 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	LRRC28	Q86X40	367 aa	Predicted RBP	11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	CELF2-AS1	Q8N7Q2	184 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	TCEANC	Q8N8B7	351 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	OR52H1	Q8NGJ2	320 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	TMEM163	Q8TC26	289 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	RAB39B	Q96DA2	213 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SIGLEC11	Q96RL6	698 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	PKP2	Q99959	881 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SLC22A4	Q9H015	551 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	OPA3	Q9H6K4	179 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	KLHDC2	Q9Y2U9	406 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	MXRA5	Q9NR99	2828 aa		11.36	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	MALRD1	Q5VYJ5	2156 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	CCDC182	A6NF36	153 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	TMEM178B	H3BS89	294 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	GMDS	O60547	372 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	IGHV2-70	P01814	119 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ANXA2	P07355	339 aa	Known RBP	11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SBK2	P0C263	348 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	CA6	P23280	308 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	POLR2I	P36954	125 aa	Known RBP	11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	RBMX	P38159	391 aa	Known RBP	11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	DDOST	P39656	456 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	NAA10	P41227	235 aa	Predicted RBP	11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	GATA4	P43694	442 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	HCCS	P53701	268 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ZNF121	P58317	390 aa	Predicted RBP	11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	HNRNPA0	Q13151	305 aa	Known RBP	11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ZNF181	Q2M3W8	571 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	LCN1P1	Q5VSP4	162 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	NXNL2	Q5VZ03	156 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	DEGS2	Q6QHC5	323 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	GLCCI1	Q86VQ1	547 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	TMEM186	Q96B77	213 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	RBM4B	Q9BQ04	359 aa	Known RBP	11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	NIPAL2	Q9H841	368 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	MRPL15	Q9P015	296 aa	Known RBP	11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ZNF319	Q9P2F9	582 aa		11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	NOP16	Q9Y3C1	178 aa	Known RBP	11.35	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	TRAV20	A0A0B4J274	112 aa		11.34	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SAC3D1	A6NKF1	404 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms