RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 GLYATL3Q5SZD4 288 aa15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 SHFQ7M4L6 423 aa15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 AMIGO2Q86SJ2 522 aa15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 PEG10Q86TG7 708 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 GLCCI1Q86VQ1 547 aa15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 OR51F2Q8NH61 342 aa15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 LRTOMTQ8WZ04 291 aa15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 RAB39BQ96DA2 213 aa15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 GAL3ST1Q99999 423 aa15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 TVP23BQ9NYZ1 205 aa15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 KIF17Q9P2E2 1029 aa15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 ARHGAP32A7KAX9 2087 aa15.58■□□□□ 0.08
SHKBP1-202ENST00000593764 CD300LBA8K4G0 201 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 G3V2T6 193 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 TMEM178BH3BS89 294 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 PLPP2O43688 288 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 SELENOFO60613 162 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 MITFO75030 526 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 SBK2P0C263 348 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 ANPEPP15144 967 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 HNF1AP20823 631 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 FASP25445 335 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 EPHA2P29317 976 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 OPRL1P41146 370 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 SLC15A1P46059 708 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 MMP16P51512 607 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 ESRRGP62508 458 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 GRB2P62993 217 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 MAB21L1Q13394 359 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 KLHL12Q53G59 568 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 KDM4DQ6B0I6 523 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 RHOUQ7L0Q8 258 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 PRSS45Q7RTY3 260 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 MRPL21Q7Z2W9 205 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 LRRC28Q86X40 367 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 OTOSQ8NHW6 89 aa15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 ZNF420Q8TAQ5 688 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-202ENST00000593764 IGHV3-64DA0A0J9YX35 117 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 ISPDA4D126 451 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 PMELP40967 661 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 SRP9P49458 86 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 EFNB1P98172 346 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 ZMYND11Q15326 602 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 SNAPC1Q16533 368 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 SLC35D3Q5M8T2 416 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 ZNF771Q7L3S4 317 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 CXXC5Q7LFL8 322 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 SPRYD4Q8WW59 207 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 SPSB4Q96A44 273 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 PLEKHA8Q96JA3 519 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 TEX12Q9BXU0 123 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 TOR3AQ9H497 397 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 G6PC2Q9NQR9 355 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 N6AMT1Q9Y5N5 214 aa15.56■□□□□ 0.08
SHKBP1-202ENST00000593764 TRAV20A0A0B4J274 112 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 PRKYO43930 277 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 CA6P23280 308 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 THBS2P35442 1172 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 GATA4P43694 442 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 CX3CR1P49238 355 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 BTG1P62324 171 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 APOFQ13790 326 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 ZDHHC13Q8IUH4 622 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 TEAD3Q99594 435 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 GABARAPL1Q9H0R8 117 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 KRT84Q9NSB2 600 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 UBAP1Q9NZ09 502 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 ZNF319Q9P2F9 582 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 KLHDC2Q9Y2U9 406 aa15.55■□□□□ 0.08
SHKBP1-202ENST00000593764 CCDC182A6NF36 153 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 GGT3PA6NGU5 568 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 IFNL4K9M1U5 179 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 CIB2O75838 187 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 LYNP07948 512 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 FCGR1AP12314 374 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 PCMT1P22061 227 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 HSD11B1P28845 292 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 CD200P41217 278 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 NAA10P41227 235 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 HCCSP53701 268 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 ZNF121P58317 390 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 ZNF181Q2M3W8 571 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 TMEM155Q4W5P6 130 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 C1orf229Q6ZS94 237 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 MOGAT3Q86VF5 341 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 CELF2-AS1Q8N7Q2 184 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 ZNF454Q8N9F8 522 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 THEM6Q8WUY1 208 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 SGK3Q96BR1 496 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 SEMA6AQ9H2E6 1030 aa15.54■□□□□ 0.08
SHKBP1-202ENST00000593764 ZAR1LA6NP61 321 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 XRCC2O43543 280 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 CYB5R3P00387 301 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 AVPP01185 164 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 ANXA2P07355 339 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 ALOX5APP20292 161 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 ZFP36P26651 326 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 RAD23AP54725 363 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 RPS7P62081 194 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 FAM3AP98173 230 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms