RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TRIM25Q14258 630 aaKnown RBP14.4□□□□□ -0.1
RETREG3-210ENST00000590541 SLC36A3Q495N2 470 aa14.4□□□□□ -0.1
RETREG3-210ENST00000590541 DHFR2Q86XF0 187 aa14.4□□□□□ -0.1
RETREG3-210ENST00000590541 OR52L1Q8NGH7 329 aa14.4□□□□□ -0.1
RETREG3-210ENST00000590541 OR1F12Q8NHA8 337 aa14.4□□□□□ -0.1
RETREG3-210ENST00000590541 SSMEM1Q8WWF3 244 aa14.4□□□□□ -0.1
RETREG3-210ENST00000590541 PTP4A1Q93096 173 aa14.4□□□□□ -0.1
RETREG3-210ENST00000590541 CMBLQ96DG6 245 aa14.4□□□□□ -0.1
RETREG3-210ENST00000590541 CDADC1Q9BWV3 514 aa14.4□□□□□ -0.1
RETREG3-210ENST00000590541 PRPF19Q9UMS4 504 aaKnown RBP14.4□□□□□ -0.1
RETREG3-210ENST00000590541 B9D1Q9UPM9 204 aa14.4□□□□□ -0.1
RETREG3-210ENST00000590541 LYVE1Q9Y5Y7 322 aa14.4□□□□□ -0.1
RETREG3-210ENST00000590541 IGLV1-36A0A0B4J1U3 117 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 IFNL4K9M1U5 179 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 TNFRSF11BO00300 401 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 GPR137BO60478 399 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 PRB2P02812 416 aaPredicted RBP14.39□□□□□ -0.11
RETREG3-210ENST00000590541 HIST1H1CP16403 213 aaKnown RBP14.39□□□□□ -0.11
RETREG3-210ENST00000590541 PITPNBP48739 271 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 HIST1H3AP68431 136 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 GK3PQ14409 553 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 ZNF404Q494X3 552 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 FAM98BQ52LJ0 330 aaKnown RBP14.39□□□□□ -0.11
RETREG3-210ENST00000590541 CCDC92Q53HC0 331 aaPredicted RBP14.39□□□□□ -0.11
RETREG3-210ENST00000590541 HIST2H3PS2Q5TEC6 136 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 LCN8Q6JVE9 175 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 PGBD2Q6P3X8 592 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 CYP2R1Q6VVX0 501 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 HIST2H3AQ71DI3 136 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 ZBTB46Q86UZ6 589 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 OR8B3Q8NGG8 313 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 HAVCR1Q96D42 359 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 OR8B2Q96RD0 313 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 NMNAT3Q96T66 252 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 COQ7Q99807 217 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 C1orf21Q9H246 121 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 KCNG2Q9UJ96 466 aa14.39□□□□□ -0.11
RETREG3-210ENST00000590541 C22orf46C9J442 243 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 C3orf80F5H4A9 247 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 PIN1P1O15428 100 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 SFTPBP07988 381 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 RAC2P15153 192 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 HOXB6P17509 224 aaKnown RBP14.38□□□□□ -0.11
RETREG3-210ENST00000590541 CENPAP49450 140 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 COX10Q12887 443 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 ECH1Q13011 328 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 C2orf68Q2NKX9 166 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 FAM201AQ5SY85 155 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 KPRPQ5T749 579 aaPredicted RBP14.38□□□□□ -0.11
RETREG3-210ENST00000590541 WDR25Q64LD2 544 aaPredicted RBP14.38□□□□□ -0.11
RETREG3-210ENST00000590541 ZNF841Q6ZN19 808 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 OR6V1Q8N148 313 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 OR4K13Q8NH42 304 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 TBC1D15Q8TC07 691 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 APOBEC3DQ96AK3 386 aaPredicted RBP14.38□□□□□ -0.11
RETREG3-210ENST00000590541 MEGF10Q96KG7 1140 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 PCGF1Q9BSM1 259 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 SRA1Q9HD15 236 aaKnown RBP14.38□□□□□ -0.11
RETREG3-210ENST00000590541 IL20Q9NYY1 176 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 CLN8Q9UBY8 286 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 STARD10Q9Y365 291 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 CDH10Q9Y6N8 788 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 DOCK11Q5JSL3 2073 aa14.38□□□□□ -0.11
RETREG3-210ENST00000590541 CENPVL3A0A0U1RRI6 287 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 C5orf63A6NC05 138 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 DCTN6O00399 190 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 RER1O15258 196 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 CCNB2O95067 398 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 FSTL3O95633 263 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 IGHV4-59P01825 116 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 ATP6V1B2P21281 511 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 CFHR2P36980 270 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 LYPD2Q6UXB3 125 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 FBXW12Q6X9E4 464 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 Q6ZSV7 163 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 RASSF6Q6ZTQ3 369 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 NLRC3Q7RTR2 1065 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 OR5AS1Q8N127 324 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 ATG16L2Q8NAA4 619 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 ZSCAN4Q8NAM6 433 aaPredicted RBP14.37□□□□□ -0.11
RETREG3-210ENST00000590541 SLC26A10Q8NG04 563 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 OR10AD1Q8NGE0 317 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 OR2AJ1Q8NGZ0 328 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 ASB9Q96DX5 294 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 TSSK2Q96PF2 358 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 TBX15Q96SF7 602 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 RPRD1BQ9NQG5 326 aaKnown RBP14.37□□□□□ -0.11
RETREG3-210ENST00000590541 LHFPL6Q9Y693 200 aa14.37□□□□□ -0.11
RETREG3-210ENST00000590541 TCRBV5S2A0A599 114 aa14.36□□□□□ -0.11
RETREG3-210ENST00000590541 PHYHO14832 338 aa14.36□□□□□ -0.11
RETREG3-210ENST00000590541 MMP9P14780 707 aa14.36□□□□□ -0.11
RETREG3-210ENST00000590541 SAMD5Q5TGI4 173 aa14.36□□□□□ -0.11
RETREG3-210ENST00000590541 OR4C15Q8NGM1 316 aa14.36□□□□□ -0.11
RETREG3-210ENST00000590541 LRGUKQ96M69 825 aa14.36□□□□□ -0.11
RETREG3-210ENST00000590541 REEP1Q9H902 201 aa14.36□□□□□ -0.11
RETREG3-210ENST00000590541 ACOXLQ9NUZ1 547 aa14.36□□□□□ -0.11
RETREG3-210ENST00000590541 BAIAP2Q9UQB8 552 aa14.36□□□□□ -0.11
RETREG3-210ENST00000590541 IGHV3-64DA0A0J9YX35 117 aa14.35□□□□□ -0.11
RETREG3-210ENST00000590541 OR6C68A6NDL8 312 aa14.35□□□□□ -0.11
RETREG3-210ENST00000590541 P2RY10O00398 339 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms