RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ZNF407Q9C0G0 2248 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 NAP1L6A6NFF2 107 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 A6NL46 340 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 ATP6V1G1O75348 118 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 PSMB1P20618 241 aaKnown RBP16.79■□□□□ 0.28
SMPD3-203ENST00000563226 SLC6A9P48067 706 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 PMPCAQ10713 525 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 UNC119Q13432 240 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 ST3GAL2Q16842 350 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 FAM27BQ5VT28 67 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 SLC22A24Q8N4F4 322 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 PAQR4Q8N4S7 273 aaPredicted RBP16.79■□□□□ 0.28
SMPD3-203ENST00000563226 TMEM251Q8N6I4 163 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 OR14K1Q8NGZ2 314 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 OR56B4Q8NH76 319 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 CPNE4Q96A23 557 aaPredicted RBP16.79■□□□□ 0.28
SMPD3-203ENST00000563226 OR10A4Q9H209 315 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 ZMAT3Q9HA38 289 aaKnown RBP16.79■□□□□ 0.28
SMPD3-203ENST00000563226 PLEK2Q9NYT0 353 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 WIPF3A6NGB9 483 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 IGLV3-1P01715 115 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 B4GALT1P15291 398 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 OTX1P32242 354 aaPredicted RBP16.78■□□□□ 0.28
SMPD3-203ENST00000563226 PRSS3P35030 304 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 DMRTC1Q5HYR2 192 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 DOK3Q7L591 496 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 GALNTL5Q7Z4T8 443 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 ACBD4Q8NC06 268 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 OR11H7Q8NGC8 314 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 OR4D10Q8NGI6 311 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 FER1L6-AS2Q96M78 137 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 MED28Q9H204 178 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 OR51J1Q9H342 316 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 TMEM38BQ9NVV0 291 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 B4GALT7Q9UBV7 327 aa16.78■□□□□ 0.28
SMPD3-203ENST00000563226 ITGB2P05107 769 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 PATE4P0C8F1 98 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 VEGFCP49767 419 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 RAG2P55895 527 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 CLDN18P56856 261 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 QRFPP83859 136 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 GPR137CQ8N3F9 429 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 OR4C16Q8NGL9 310 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 GPX8Q8TED1 209 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 FAM46BQ96A09 425 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 IP6K3Q96PC2 410 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 FAM117AQ9C073 453 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 PLSCR3Q9NRY6 295 aa16.77■□□□□ 0.28
SMPD3-203ENST00000563226 ARGFXA6NJG6 315 aa16.77■□□□□ 0.27
SMPD3-203ENST00000563226 ARPC1BO15143 372 aaKnown RBP16.77■□□□□ 0.27
SMPD3-203ENST00000563226 ZNF93P35789 620 aaPredicted RBP16.77■□□□□ 0.27
SMPD3-203ENST00000563226 MRPS15P82914 257 aaKnown RBP16.77■□□□□ 0.27
SMPD3-203ENST00000563226 SRSF6Q13247 344 aaKnown RBP16.77■□□□□ 0.27
SMPD3-203ENST00000563226 GALNT16Q8N428 558 aa16.77■□□□□ 0.27
SMPD3-203ENST00000563226 MDS2Q8NDY4 140 aa16.77■□□□□ 0.27
SMPD3-203ENST00000563226 UQCC2Q9BRT2 126 aa16.77■□□□□ 0.27
SMPD3-203ENST00000563226 ING3Q9NXR8 418 aa16.77■□□□□ 0.27
SMPD3-203ENST00000563226 DNAJC13O75165 2243 aa16.77■□□□□ 0.27
SMPD3-203ENST00000563226 M0R135 149 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 PEX14O75381 377 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 HPXP02790 462 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 VSIG8P0DPA2 414 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 SFRP5Q5T4F7 317 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 CPT1CQ8TCG5 803 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 CMBLQ96DG6 245 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 SEH1LQ96EE3 360 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 ZNF799Q96GE5 643 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 B3GNT4Q9C0J1 378 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 PAQR5Q9NXK6 330 aaPredicted RBP16.76■□□□□ 0.27
SMPD3-203ENST00000563226 ASPMQ8IZT6 3477 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 IGKV1-9A0A0C4DH69 117 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 IGHV3-9P01782 118 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 SP1P08047 785 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 STOMP27105 288 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 MEOX1P50221 254 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 PLGLB1Q02325 96 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 SF3B4Q15427 424 aaKnown RBP eCLIP16.76■□□□□ 0.27
SMPD3-203ENST00000563226 CEACAM16Q2WEN9 425 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 SNAI3Q3KNW1 292 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 ZNF774Q6NX45 483 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 VASH2Q86V25 355 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 DVL3Q92997 716 aaPredicted RBP16.76■□□□□ 0.27
SMPD3-203ENST00000563226 PTX4Q96A99 478 aa16.76■□□□□ 0.27
SMPD3-203ENST00000563226 FREM1Q5H8C1 2179 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 LINC01387J3KSC0 135 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 NME2P1O60361 137 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 BPNT1O95861 308 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 YES1P07947 543 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 CSF1P09603 554 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 GTF2F2P13984 249 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 CXCL3P19876 107 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 RAB6AP20340 208 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 NME2P22392 152 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 HGFACQ04756 655 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 MAB21L1Q13394 359 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 PDSS1Q5T2R2 415 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 AWAT2Q6E213 333 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 RTN4RL2Q86UN3 420 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 ANGPTL5Q86XS5 388 aa16.75■□□□□ 0.27
SMPD3-203ENST00000563226 FGFBP3Q8TAT2 258 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms