RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 NMNAT2Q9BZQ4 307 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 C7orf69Q9H7B7 122 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 KCNG2Q9UJ96 466 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 POMPQ9Y244 141 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 A0A0G2JMP0 313 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 A0A0X1KG70 313 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 CD300LBA8K4G0 201 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 TRAPPC2LH3BP13 241 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 TCF21O43680 179 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 TIPRLO75663 272 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 DNAJC8O75937 253 aaPredicted RBP10.52□□□□□ -0.73
SMAD3-208ENST00000558827 ZNF3P17036 446 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 GSTT1P30711 240 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 GRK5P34947 590 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 SRP9P49458 86 aaKnown RBP10.52□□□□□ -0.73
SMAD3-208ENST00000558827 SLC25A1P53007 311 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 HCCSP53701 268 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 OR8G1Q15617 311 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 MPPED2Q15777 294 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 GFOD2Q3B7J2 385 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 DNAL1Q4LDG9 190 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 KLHL12Q53G59 568 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 LIPNQ5VXI9 398 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 SLC27A4Q6P1M0 643 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 DPY19L4Q7Z388 723 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 LRRC28Q86X40 367 aaPredicted RBP10.52□□□□□ -0.73
SMAD3-208ENST00000558827 BBS1Q8NFJ9 593 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 OR4M2Q8NGB6 313 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 CADM1Q9BY67 442 aaKnown RBP10.52□□□□□ -0.73
SMAD3-208ENST00000558827 PATZ1Q9HBE1 687 aaKnown RBP10.52□□□□□ -0.73
SMAD3-208ENST00000558827 CMC2Q9NRP2 79 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 BAIAP2Q9UQB8 552 aa10.52□□□□□ -0.73
SMAD3-208ENST00000558827 DOCK11Q5JSL3 2073 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 CEACAM18A8MTB9 384 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 GSC2O15499 205 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 SELENOFO60613 162 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 ANXA2P07355 339 aaKnown RBP10.51□□□□□ -0.73
SMAD3-208ENST00000558827 NAA10P41227 235 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-208ENST00000558827 CX3CR1P49238 355 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 POU4F2Q12837 409 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 MAB21L1Q13394 359 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 FAM57BQ71RH2 274 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 CPOQ8IVL8 374 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 KLHL36Q8N4N3 616 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 SPICQ8N5J4 248 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 INTS14Q96SY0 518 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 KCNJ15Q99712 375 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 ABHD6Q9BV23 337 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 PPP1R3EQ9H7J1 279 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 TMEM165Q9HC07 324 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 OPN4Q9UHM6 478 aa10.51□□□□□ -0.73
SMAD3-208ENST00000558827 IGHV3OR16-10A0A075B7F0 116 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 TCRBV3S1A0A5B6 114 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 PRR23D1E9PI22 279 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-208ENST00000558827 C3orf80F5H4A9 247 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 J3QW42 95 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 FAM20BO75063 409 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 FOXH1O75593 365 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 GRPP07492 148 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 PRR23D2P0DMB1 279 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-208ENST00000558827 EPHA1P21709 976 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 CD80P33681 288 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 MDH2P40926 338 aaKnown RBP10.5□□□□□ -0.73
SMAD3-208ENST00000558827 RPS7P62081 194 aaKnown RBP10.5□□□□□ -0.73
SMAD3-208ENST00000558827 SFRP4Q6FHJ7 346 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-208ENST00000558827 DRAM2Q6UX65 266 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 LYPD2Q6UXB3 125 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 CD300LDQ6UXZ3 194 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 ZNF826PQ6ZT77 177 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 RFLNBQ8N5W9 214 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-208ENST00000558827 OR56B2PQ8NGI1 322 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 THEM6Q8WUY1 208 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 SLC6A7Q99884 636 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 TMEM246Q9BRR3 403 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 ZNF556Q9HAH1 456 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 DDX28Q9NUL7 540 aaKnown RBP10.5□□□□□ -0.73
SMAD3-208ENST00000558827 TVP23BQ9NYZ1 205 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 DNAJB9Q9UBS3 223 aa10.5□□□□□ -0.73
SMAD3-208ENST00000558827 ZNF878C9JN71 531 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 M0R129 80 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 MITFO75030 526 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-208ENST00000558827 GLCEO94923 617 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 WNT2P09544 360 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 OSMP13725 252 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 IRF2P14316 349 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 RPS2P15880 293 aaKnown RBP10.49□□□□□ -0.73
SMAD3-208ENST00000558827 HSD11B1P28845 292 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 THBS2P35442 1172 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 RAD23AP54725 363 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 PCK2Q16822 640 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 TIGD6Q17RP2 521 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 TMEM155Q4W5P6 130 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 SGK3Q96BR1 496 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 PLEKHA8Q96JA3 519 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 ADAT1Q9BUB4 502 aaKnown RBP10.49□□□□□ -0.73
SMAD3-208ENST00000558827 TTTY10Q9BZA0 68 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 NTN4Q9HB63 628 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 ZNF319Q9P2F9 582 aa10.49□□□□□ -0.73
SMAD3-208ENST00000558827 KLHDC2Q9Y2U9 406 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms