RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 SPIBQ01892 262 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 ZNF362Q5T0B9 420 aaPredicted RBP9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 DUX4L9Q6RFH8 374 aaPredicted RBP9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 DCDC5Q6ZRR9 648 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 TBX15Q96SF7 602 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 ATF6BQ99941 703 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 PCGF1Q9BSM1 259 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 IFT27Q9BW83 186 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 CHIAQ9BZP6 476 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 MYLK2Q9H1R3 596 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 EGLN3Q9H6Z9 239 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 PPP1R3EQ9H7J1 279 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 ZMAT3Q9HA38 289 aaKnown RBP9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 C1RLQ9NZP8 487 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 DUX4Q9UBX2 424 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 IGHV3OR15-7A0A075B7D8 119 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 LRRC30A6NM36 301 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 CD300LBA8K4G0 201 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 SRRM5B3KS81 715 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 M0R135 149 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 PHYHO14832 338 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 GADD45GO95257 159 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 FSTL3O95633 263 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 RENP00797 406 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 HLA-DQA2P01906 255 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 SLC2A1P11166 492 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 SLC6A6P31641 620 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 CFHR2P36980 270 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 GSSP48637 474 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 DLX1P56177 255 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 PRB3Q04118 309 aaPredicted RBP9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 OR8G1Q15617 311 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 PDLIM3Q53GG5 364 aaPredicted RBP9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 GLYATL3Q5SZD4 288 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 DNM1P34Q6PK57 102 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 FIP1L1Q6UN15 594 aaKnown RBP9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 Q6YL49 198 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 PGAP1Q75T13 922 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 NLRC3Q7RTR2 1065 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 C1orf87Q8N0U7 546 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 CELF2-AS1Q8N7Q2 184 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 OR8D4Q8NGM9 314 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 WFDC12Q8WWY7 111 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 ZDHHC16Q969W1 377 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 SEH1LQ96EE3 360 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 ZNF799Q96GE5 643 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 PYURFQ96I23 114 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 TECTBQ96PL2 329 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 NDEL1Q9GZM8 345 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 SLITRK2Q9H156 845 aa9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 MMADHCQ9H3L0 296 aaPredicted RBP9.57□□□□□ -0.88
PRPF40B-212ENST00000551111 ADAM20O43506 726 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 OR10H3O60404 316 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 CCDC22O60826 627 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 PTBP3O95758 552 aaKnown RBP9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 GYPAP02724 150 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 GRPP07492 148 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 MELTFP08582 738 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 PPP1R8Q12972 351 aaKnown RBP9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 PGBD2Q6P3X8 592 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 PGM2L1Q6PCE3 622 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 ZNF620Q6ZNG0 422 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 RHOUQ7L0Q8 258 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 MRPL21Q7Z2W9 205 aaKnown RBP9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 C11orf53Q8IXP5 236 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 PDZD9Q8IXQ8 264 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 LNX2Q8N448 690 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 OR9Q2Q8NGE9 314 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 OR2AJ1Q8NGZ0 328 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 SPRYD4Q8WW59 207 aaPredicted RBP9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 ELAC2Q9BQ52 826 aaKnown RBP9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 ADAT1Q9BUB4 502 aaKnown RBP9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 GORASP2Q9H8Y8 452 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 RNF7Q9UBF6 113 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 N6AMT1Q9Y5N5 214 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 MMP24Q9Y5R2 645 aa9.56□□□□□ -0.88
PRPF40B-212ENST00000551111 ZNF879B4DU55 563 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 LGALS8O00214 317 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 BHLHE40O14503 412 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 ENSAO43768 121 aaKnown RBP9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 TOX4O94842 621 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 GYPBP06028 91 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 CLUP10909 449 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 IRF2P14316 349 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 CPT2P23786 658 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 NOS3P29474 1203 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 RRM2P31350 389 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 OTX1P32242 354 aaPredicted RBP9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 PRKXP51817 358 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 RAG2P55895 527 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 TPTEP56180 551 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 ARF6P62330 175 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 ECH1Q13011 328 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 MALLQ13021 153 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 KRT72Q14CN4 511 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 MIDNQ504T8 468 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 GPR157Q5UAW9 335 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 WDR86Q86TI4 376 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 FAM90A1Q86YD7 464 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms