RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 THEM6Q8WUY1 208 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 SPRYD4Q8WW59 207 aaPredicted RBP10.02□□□□□ -0.81
RAB5C-204ENST00000547517 TIMD4Q96H15 378 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 OR2V2Q96R30 315 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 RBM4BQ9BQ04 359 aaKnown RBP10.02□□□□□ -0.81
RAB5C-204ENST00000547517 OSBPL10Q9BXB5 764 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 GABARAPL3Q9BY60 117 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 TOR3AQ9H497 397 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 WIPI2Q9Y4P8 454 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 TANC2Q9HCD6 1990 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 IGHV3-64DA0A0J9YX35 117 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 ISPDA4D126 451 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 GGT3PA6NGU5 568 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 H0YL77 283 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 EI24O14681 340 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 MLNRO43193 412 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 TNFRSF1AP19438 455 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 POLR2IP36954 125 aaKnown RBP10.01□□□□□ -0.81
RAB5C-204ENST00000547517 ZNF121P58317 390 aaPredicted RBP10.01□□□□□ -0.81
RAB5C-204ENST00000547517 GFOD2Q3B7J2 385 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 LRRN1Q6UXK5 716 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 FAM57BQ71RH2 274 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 SLC16A9Q7RTY1 509 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 OR13G1Q8NGZ3 307 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 TMEM163Q8TC26 289 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 HPS1Q92902 700 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 IL4I1Q96RQ9 567 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 CNN2Q99439 309 aaKnown RBP10.01□□□□□ -0.81
RAB5C-204ENST00000547517 SLC30A2Q9BRI3 323 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 TTTY10Q9BZA0 68 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 BRD7Q9NPI1 651 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 DCAF16Q9NXF7 216 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 IL19Q9UHD0 177 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 LAMP5Q9UJQ1 280 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 KCNS2Q9ULS6 477 aa10.01□□□□□ -0.81
RAB5C-204ENST00000547517 NAV3Q8IVL0 2385 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 ABCA2Q9BZC7 2435 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 CD300LBA8K4G0 201 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 F5H5P2 479 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 XRCC2O43543 280 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 CRLF1O75462 422 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 TGFAP01135 160 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 HLA-DPB1P04440 258 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 ALPLP05186 524 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 HCCSP53701 268 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 CDH15P55291 814 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 SLC3A1Q07837 685 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 TIGD6Q17RP2 521 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 NXNL2Q5VZ03 156 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 HIST2H2ABQ8IUE6 130 aaPredicted RBP10□□□□□ -0.81
RAB5C-204ENST00000547517 C10orf67Q8IYJ2 551 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 LINC01356Q8N9X3 169 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 OR56B2PQ8NGI1 322 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 RAB1CQ92928 201 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 MEGF10Q96KG7 1140 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 TEAD3Q99594 435 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 GAL3ST1Q99999 423 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 ADAT1Q9BUB4 502 aaKnown RBP10□□□□□ -0.81
RAB5C-204ENST00000547517 OPA3Q9H6K4 179 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 LPAR2Q9HBW0 351 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 S100A14Q9HCY8 104 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 TMEM106BQ9NUM4 274 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 TMEM100Q9NV29 134 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 H2AFY2Q9P0M6 372 aaPredicted RBP10□□□□□ -0.81
RAB5C-204ENST00000547517 PPP1R3CQ9UQK1 317 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 LRP12Q9Y561 859 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 ORC6Q9Y5N6 252 aa10□□□□□ -0.81
RAB5C-204ENST00000547517 NIPBLQ6KC79 2804 aaeCLIP10□□□□□ -0.81
RAB5C-204ENST00000547517 SONP18583 2426 aaKnown RBP9.99□□□□□ -0.81
RAB5C-204ENST00000547517 YLPM1P49750 1951 aaKnown RBP9.99□□□□□ -0.81
RAB5C-204ENST00000547517 SLC22A31A6NKX4 558 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 FAM157AC9JC47 383 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 PSMD9O00233 223 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 LMX1BO60663 402 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 APOC1P02654 83 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 ALOX5APP20292 161 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 CA6P23280 308 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 SRP9P49458 86 aaKnown RBP9.99□□□□□ -0.81
RAB5C-204ENST00000547517 MMP16P51512 607 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 RAD23AP54725 363 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 PSMA6P60900 246 aaKnown RBP9.99□□□□□ -0.81
RAB5C-204ENST00000547517 OR8G1Q15617 311 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 AADACL4Q5VUY2 407 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 RHOUQ7L0Q8 258 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 MEPCEQ7L2J0 689 aaKnown RBP9.99□□□□□ -0.81
RAB5C-204ENST00000547517 PRSS45Q7RTY3 260 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 KRT77Q7Z794 578 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 PEG10Q86TG7 708 aaKnown RBP9.99□□□□□ -0.81
RAB5C-204ENST00000547517 GID4Q8IVV7 300 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 CBR4Q8N4T8 237 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 RFLNBQ8N5W9 214 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 ZNF420Q8TAQ5 688 aaPredicted RBP9.99□□□□□ -0.81
RAB5C-204ENST00000547517 FAM81AQ8TBF8 368 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 DVL3Q92997 716 aaPredicted RBP9.99□□□□□ -0.81
RAB5C-204ENST00000547517 STMN2Q93045 179 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 REEP6Q96HR9 211 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 PGAM5Q96HS1 289 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 REPIN1Q9BWE0 567 aaKnown RBP9.99□□□□□ -0.81
RAB5C-204ENST00000547517 YIPF3Q9GZM5 350 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 OR10A2Q9H208 303 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms