RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 KIF26BQ2KJY2 2108 aa20.65■□□□□ 0.9
FOXA1-202ENST00000545425 TMEM14DPA8MWL7 114 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 FGF2P09038 288 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 ZNF20P17024 532 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 ZBTB25P24278 435 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 CLRN1P58418 232 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 ZNF660Q6AZW8 331 aaPredicted RBP20.64■□□□□ 0.9
FOXA1-202ENST00000545425 CPEB2Q7Z5Q1 589 aaKnown RBP20.64■□□□□ 0.9
FOXA1-202ENST00000545425 TMED4Q7Z7H5 227 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 KDM8Q8N371 416 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 MITD1Q8WV92 249 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 PHB2Q99623 299 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 SLC6A7Q99884 636 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 SLC26A1Q9H2B4 701 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 TMEM9BQ9NQ34 198 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 IFT46Q9NQC8 304 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 B3GAT1Q9P2W7 334 aa20.64■□□□□ 0.9
FOXA1-202ENST00000545425 TMEM235A6NFC5 223 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 OR5H14A6NHG9 310 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 CCL1P22362 96 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 GNALP38405 381 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 PNLIPRP3Q17RR3 467 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 CDNFQ49AH0 187 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 ARSKQ6UWY0 536 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 SPERTQ8NA61 448 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 OXGR1Q96P68 337 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 NUDT22Q9BRQ3 303 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 MED29Q9NX70 200 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 RARRES3Q9UL19 164 aa20.64■□□□□ 0.89
FOXA1-202ENST00000545425 TRAV14DV4A0A0A6YYC5 116 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 TLX3O43711 291 aaPredicted RBP20.63■□□□□ 0.89
FOXA1-202ENST00000545425 PGA4P0DJD7 388 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 PGA3P0DJD8 388 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 NAT1P18440 290 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 CBX5P45973 191 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 CXADRP78310 365 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 MYBPHQ13203 477 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 OTPQ5XKR4 325 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 PAQR4Q8N4S7 273 aaPredicted RBP20.63■□□□□ 0.89
FOXA1-202ENST00000545425 OR1J2Q8NGS2 313 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 OR10R2Q8NGX6 335 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 SCGB3A2Q96PL1 93 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 CDC6Q99741 560 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 GHRLQ9UBU3 117 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 NOP16Q9Y3C1 178 aaKnown RBP20.63■□□□□ 0.89
FOXA1-202ENST00000545425 GON4LQ3T8J9 2241 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 DCHS1Q96JQ0 3298 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 CACNA1AO00555 2505 aa20.63■□□□□ 0.89
FOXA1-202ENST00000545425 CEP192Q8TEP8 1941 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 LOC105371267A0A1B0GV96 52 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 KANTRA0A1W2PQU2 76 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 HLA-AP01891 365 aaKnown RBP20.62■□□□□ 0.89
FOXA1-202ENST00000545425 GRB2P62993 217 aaKnown RBP20.62■□□□□ 0.89
FOXA1-202ENST00000545425 NR0B2Q15466 257 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 MOGAT2Q3SYC2 334 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 SFRP5Q5T4F7 317 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 C11orf87Q6NUJ2 197 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 SLC25A47Q6Q0C1 308 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 ACBD4Q8NC06 268 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 GALNT11Q8NCW6 608 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 COQ8AQ8NI60 647 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 KCNG3Q8TAE7 436 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 WDR77Q9BQA1 342 aaPredicted RBP20.62■□□□□ 0.89
FOXA1-202ENST00000545425 METTL7AQ9H8H3 244 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 MYOTQ9UBF9 498 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 TNFSF18Q9UNG2 199 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 VDAC3Q9Y277 283 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 RP1P56715 2156 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 A0A087WZY1 265 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 IGKV1D-43A0A0B4J1Z2 117 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 IGHV3-20A0A0C4DH32 117 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 CDX4O14627 284 aaPredicted RBP20.62■□□□□ 0.89
FOXA1-202ENST00000545425 TM4SF5O14894 197 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 VSIG8P0DPA2 414 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 ZNF28P17035 718 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 ZNF93P35789 620 aaPredicted RBP20.62■□□□□ 0.89
FOXA1-202ENST00000545425 OC90Q02509 493 aaPredicted RBP20.62■□□□□ 0.89
FOXA1-202ENST00000545425 UNC119Q13432 240 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 SCGB2B2Q4G0G5 96 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 TMEM81Q6P7N7 255 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 ALKAL2Q6UX46 152 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 WDR89Q96FK6 387 aaPredicted RBP20.62■□□□□ 0.89
FOXA1-202ENST00000545425 FREM3P0C091 2139 aa20.62■□□□□ 0.89
FOXA1-202ENST00000545425 STK17BO94768 372 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 IFNA6P05013 189 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 CTSSP25774 331 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 ARL6IP1Q15041 203 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 ACOT7LQ6ZUV0 252 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 DOK3Q7L591 496 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 TMPRSS9Q7Z410 1059 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 ARRDC1Q8N5I2 433 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 CHST4Q8NCG5 386 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 BVESQ8NE79 360 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 OR52N4Q8NGI2 321 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 POC1BQ8TC44 478 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 ADAT3Q96EY9 351 aaPredicted RBP20.61■□□□□ 0.89
FOXA1-202ENST00000545425 CCDC120Q96HB5 630 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 PTGES2Q9H7Z7 377 aa20.61■□□□□ 0.89
FOXA1-202ENST00000545425 FARSAQ9Y285 508 aaKnown RBP20.61■□□□□ 0.89
FOXA1-202ENST00000545425 POLR1DQ9Y2S0 133 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms