RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 LRRC36Q1X8D7 754 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 SPRNQ5BIV9 151 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 DEGS2Q6QHC5 323 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 USP51Q70EK9 711 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 FAM57BQ71RH2 274 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 MRPL21Q7Z2W9 205 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 KRT77Q7Z794 578 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 GALNT4Q8N4A0 578 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 OR51G2Q8NGK0 314 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 ASB17Q8WXJ9 295 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 SPSB4Q96A44 273 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 MNTQ99583 582 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 CHODLQ9H9P2 273 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 SAP30LQ9HAJ7 183 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 CLN6Q9NWW5 311 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 SMPD3Q9NY59 655 aaPredicted RBP19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 ZNF319Q9P2F9 582 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 LRP12Q9Y561 859 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 LOC100130705A0A1B0GUX0 176 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 PSMD9O00233 223 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 SLC16A6O15403 523 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 TPD52L2O43399 206 aaKnown RBP19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 ENTPD6O75354 484 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 GABRB1P18505 474 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 OCLNQ16625 522 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 KCTD18Q6PI47 426 aaPredicted RBP19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 ZNF540Q8NDQ6 660 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 BHLHE23Q8NDY6 225 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 OR2Z1Q8NG97 314 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 RFKQ969G6 155 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 ELMOD3Q96FG2 381 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 OR8B4Q96RC9 309 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 SLC30A2Q9BRI3 323 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 NIPAL2Q9H841 368 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 SP140LQ9H930 580 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 C8orf4Q9NR00 106 aa19.29■□□□□ 0.68
SFSWAP-204ENST00000535399 IGHV4-61A0A0C4DH41 118 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 IGHV1-69-2A0A0G2JMI3 117 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 A0A1B0GWJ7 208 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 CD300LBA8K4G0 201 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 CASQ2O14958 399 aaPredicted RBP19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 XRCC2O43543 280 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 CDC14BO60729 498 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 APOL3O95236 402 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 USF1P22415 310 aaPredicted RBP19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 CRYBB2P43320 205 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 PSMA6P60900 246 aaKnown RBP19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 TNFAIP6P98066 277 aaPredicted RBP19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 POU4F2Q12837 409 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 ZNF679Q8IYX0 411 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 PACRGLQ8N7B6 248 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 OR52H1Q8NGJ2 320 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 OR13G1Q8NGZ3 307 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 SGK3Q96BR1 496 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 TTTY10Q9BZA0 68 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 EGLN1Q9GZT9 426 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 OPA3Q9H6K4 179 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 BRD7Q9NPI1 651 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 ZNF275Q9NSD4 429 aaPredicted RBP19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 AASSQ9UDR5 926 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 CACNG2Q9Y698 323 aa19.28■□□□□ 0.68
SFSWAP-204ENST00000535399 TBX1O43435 398 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 ZNF254O75437 659 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 LY6G6DO95868 133 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 CXCR4P61073 352 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 KRTAP1-1Q07627 177 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 OGFRL1Q5TC84 451 aaPredicted RBP19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 MEDAGQ5VYS4 303 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 ZNF322Q6U7Q0 402 aaPredicted RBP19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 ENTHD1Q8IYW4 607 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 RHOXF1Q8NHV9 184 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 PGAM5Q96HS1 289 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 MROQ9BYG7 248 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 OR10A2Q9H208 303 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 DCLRE1BQ9H816 532 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 TMEM100Q9NV29 134 aa19.27■□□□□ 0.68
SFSWAP-204ENST00000535399 TLN2Q9Y4G6 2542 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 CHD3Q12873 2000 aaKnown RBP19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 ZNF670-ZNF695F2Z2N8 137 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 PHYHO14832 338 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 MLNRO43193 412 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 TNFSF4P23510 183 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 DCTDP32321 178 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 TMEM33P57088 247 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 CLEC9AQ6UXN8 241 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 SSX6Q7RTT6 188 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 OR10AD1Q8NGE0 317 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 SPRYD4Q8WW59 207 aaPredicted RBP19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 REEP6Q96HR9 211 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 APOL4Q9BPW4 351 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 FAM206AQ9NX38 181 aa19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 NKX1-2Q9UD57 310 aaPredicted RBP19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.26■□□□□ 0.67
SFSWAP-204ENST00000535399 hCG_38984A0A1B0GV85 526 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 A0A1W2PQL4 384 aaPredicted RBP19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 GGT3PA6NGU5 568 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 H0YL77 283 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 MAGEB4O15481 346 aaPredicted RBP19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 TACSTD2P09758 323 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms