RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 HHLA2Q9UM44 414 aa3.9□□□□□ -1.78
CTSC-208ENST00000533897 NCOA6Q14686 2063 aaPredicted RBP3.9□□□□□ -1.78
CTSC-208ENST00000533897 CCDC85CA6NKD9 419 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 CLDN4O14493 209 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 RAD1O60671 282 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 SFT2D2O95562 160 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 ERCC1P07992 297 aaPredicted RBP3.9□□□□□ -1.79
CTSC-208ENST00000533897 BCKDHBP21953 392 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 GPR85P60893 370 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 ZP2Q05996 745 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 ODF4Q2M2E3 257 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 C4orf46Q504U0 113 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 ZNF542PQ5EBM4 170 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 RAB12Q6IQ22 244 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 PGAP1Q75T13 922 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 DCXRQ7Z4W1 244 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 TRAPPC6BQ86SZ2 158 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 NAA40Q86UY6 237 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 OR1M1Q8NGA1 313 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 OR10C1Q96KK4 312 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 OR11A1Q9GZK7 315 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 SEBOXQ9HB31 216 aaPredicted RBP3.9□□□□□ -1.79
CTSC-208ENST00000533897 MMP26Q9NRE1 261 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 ZDHHC8Q9ULC8 765 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 MRPS33Q9Y291 106 aaKnown RBP3.9□□□□□ -1.79
CTSC-208ENST00000533897 FRYLO94915 3013 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 TCRBV21S2A2A0A5A6 115 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 ZNF726A6NNF4 738 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 TRAF3IP2O43734 574 aaPredicted RBP3.9□□□□□ -1.79
CTSC-208ENST00000533897 CDC14BO60729 498 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 STK17BO94768 372 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 FCER2P06734 321 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 PRF1P14222 555 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 ABOP16442 354 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 CRABP1P29762 137 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 RFC3P40938 356 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 NPBWR1P48145 328 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 SUMO3P55854 103 aaPredicted RBP3.9□□□□□ -1.79
CTSC-208ENST00000533897 H3F3AP84243 136 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 MC2RQ01718 297 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 PRSS54Q6PEW0 395 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 KCTD18Q6PI47 426 aaPredicted RBP3.9□□□□□ -1.79
CTSC-208ENST00000533897 ASCL4Q6XD76 172 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 IL34Q6ZMJ4 242 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 PRR22Q8IZ63 422 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 FADS6Q8N9I5 356 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 KDF1Q8NAX2 398 aaPredicted RBP3.9□□□□□ -1.79
CTSC-208ENST00000533897 OR13C3Q8NGS6 347 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 ST8SIA1Q92185 356 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 NABP1Q96AH0 204 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 MMABQ96EY8 250 aaPredicted RBP3.9□□□□□ -1.79
CTSC-208ENST00000533897 NRSN2Q9GZP1 204 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 VN1R1Q9GZP7 353 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 PBOV1Q9GZY1 135 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 ZMAT3Q9HA38 289 aaKnown RBP3.9□□□□□ -1.79
CTSC-208ENST00000533897 LPAR3Q9UBY5 353 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 IKZF2Q9UKS7 526 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 CDV3Q9UKY7 258 aaKnown RBP3.9□□□□□ -1.79
CTSC-208ENST00000533897 MKL2Q9ULH7 1088 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 AMDHD2Q9Y303 409 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 STARD10Q9Y365 291 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 TIMM10BQ9Y5J6 103 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 SESN1Q9Y6P5 492 aa3.9□□□□□ -1.79
CTSC-208ENST00000533897 LINC01387J3KSC0 135 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 CSTBP04080 98 aaKnown RBP3.89□□□□□ -1.79
CTSC-208ENST00000533897 RLN1P04808 185 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 THEGLP0DJG4 465 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 HKR1P10072 659 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 PGAM2P15259 253 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 GNB3P16520 340 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 PSMB6P28072 239 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 GMFBP60983 142 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 HSD11B2P80365 405 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 GLO1Q04760 184 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 SPOCK1Q08629 439 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 MFAP5Q13361 173 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 CDNFQ49AH0 187 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 TMEM128Q5BJH2 165 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 CLEC18BQ6UXF7 455 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 ZNF704Q6ZNC4 412 aaPredicted RBP3.89□□□□□ -1.79
CTSC-208ENST00000533897 ZNF784Q8NCA9 323 aaPredicted RBP3.89□□□□□ -1.79
CTSC-208ENST00000533897 OR14K1Q8NGZ2 314 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 NUDCD2Q8WVJ2 157 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 TSEN15Q8WW01 171 aaKnown RBP3.89□□□□□ -1.79
CTSC-208ENST00000533897 C11orf40Q8WZ69 217 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 ZNF501Q96CX3 271 aaPredicted RBP3.89□□□□□ -1.79
CTSC-208ENST00000533897 SHDQ96IW2 340 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 ADAT1Q9BUB4 502 aaKnown RBP3.89□□□□□ -1.79
CTSC-208ENST00000533897 SELENOIQ9C0D9 397 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 CAPN10Q9HC96 672 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 SH2D2AQ9NP31 389 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 IGKV1D-8A0A087WSZ0 117 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 IGHV1OR15-9A0A0B4J2B8 117 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 A6NIZ1 184 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 H3BSH0 61 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 P2RY10O00398 339 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 SOCS1O15524 211 aa3.89□□□□□ -1.79
CTSC-208ENST00000533897 GSTP1P09211 210 aaKnown RBP3.89□□□□□ -1.79
CTSC-208ENST00000533897 HIST1H1DP16402 221 aaKnown RBP3.89□□□□□ -1.79
CTSC-208ENST00000533897 PGCP20142 388 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms