RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 MRPS34P82930 218 aaKnown RBP6.73□□□□□ -1.33
HDAC3-216ENST00000523088 IL10RBQ08334 325 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 OPCMLQ14982 345 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 RTP5Q14D33 572 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 HERPUD1Q15011 391 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 AGERQ15109 404 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 HMGN3Q15651 99 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 TNXAQ16473 311 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 TMEM52BQ4KMG9 183 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 ARTNQ5T4W7 220 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 C1orf194Q5T5A4 169 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 HES3Q5TGS1 186 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 FAM78BQ5VT40 261 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 TMEM225Q6GV28 225 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 OR4A47Q6IF82 309 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 TCTN3Q6NUS6 607 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 FAHD1Q6P587 224 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 ABHD17CQ6PCB6 329 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 OLIG3Q7RTU3 272 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF367Q7RTV3 350 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 KLHDC8AQ8IYD2 350 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 LILRA2Q8N149 483 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 SLC22A18ASQ8N1D0 253 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 D2HGDHQ8N465 521 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 DCBLD1Q8N8Z6 715 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF738Q8NE65 137 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF548Q8NEK5 533 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-216ENST00000523088 B3GNT7Q8NFL0 401 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 SLC26A10Q8NG04 563 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 OR1S1Q8NH92 325 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 SLC35B2Q8TB61 432 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 SMAP2Q8WU79 429 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-216ENST00000523088 HIST1H2BAQ96A08 127 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 RERGQ96A58 199 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-216ENST00000523088 TM4SF19Q96DZ7 209 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 ZFP3Q96NJ6 502 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 RDH12Q96NR8 316 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 NEDD4LQ96PU5 975 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 F2RL3Q96RI0 385 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 PAFAH2Q99487 392 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 SPAG8Q99932 426 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-216ENST00000523088 NRIP2Q9BQI9 281 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 MAP1LC3CQ9BXW4 147 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 BARHL1Q9BZE3 327 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 NMNAT2Q9BZQ4 307 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 PATZ1Q9HBE1 687 aaKnown RBP6.73□□□□□ -1.33
HDAC3-216ENST00000523088 Q9N2J8 555 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 NOX4Q9NPH5 578 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 TMEM38BQ9NVV0 291 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 NLKQ9UBE8 527 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 SLC25A10Q9UBX3 287 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-216ENST00000523088 LPAR3Q9UBY5 353 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 CHST2Q9Y4C5 530 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 SPIN1Q9Y657 262 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-216ENST00000523088 ZZEF1O43149 2961 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 RP1P56715 2156 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 KIR2DL5BA0A0G2JN68 375 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 KIR2DL5BA0A0G2JPC4 375 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 SSU72P8A0A1W2PR75 194 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 LRIT2A6NDA9 550 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 G3V4G9 280 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 FAM72CH0Y354 149 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 PHOX2AO14813 284 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 MFSD11O43934 449 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 RDH16O75452 317 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 RCBTB2O95199 551 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 ETHE1O95571 254 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 HLA-DQB1P01920 261 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 FTLP02792 175 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-216ENST00000523088 GKN3PP0CG01 181 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 SMIM17P0DL12 118 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 EPXP11678 715 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 GABRB1P18505 474 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 HRH2P25021 359 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 DUSP1P28562 367 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 SSTR1P30872 391 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 CHRNB4P30926 498 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 CCKBRP32239 447 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 HCCSP53701 268 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 RELBQ01201 579 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 BCL2L1Q07817 233 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 GAGE5Q13069 117 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 GAGE6Q13070 117 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 FZD2Q14332 565 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF235Q14590 738 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 ELOCQ15369 112 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 NR0B2Q15466 257 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 PDZD11Q5EBL8 140 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 TMEM69Q5SWH9 247 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 FAM72AQ5TYM5 149 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 FAM72DQ6L9T8 149 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 FAM72BQ86X60 149 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 DTX1Q86Y01 620 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 ADGRF3Q8IZF5 1079 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 KIR2DL5AQ8N109 375 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 SLC25A45Q8N413 288 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 OR2Z1Q8NG97 314 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 OR4S1Q8NGB4 309 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 OR10D4PQ8NGN7 298 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms