RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 POP5Q969H6 163 aaKnown RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 TMEM54Q969K7 222 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 MCHR2Q969V1 340 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 FAM162AQ96A26 154 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ZNF524Q96C55 264 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 BPIFA2Q96DR5 249 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 MAELQ96JY0 434 aaKnown RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ATP6V1G3Q96LB4 118 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 C4orf45Q96LM5 186 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR8B2Q96RD0 313 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 CCT8L2Q96SF2 557 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 CGREF1Q99674 301 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ARHGDIGQ99819 225 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ALG12Q9BV10 488 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ELOVL1Q9BW60 279 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 TMEM120AQ9BXJ8 343 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 PLA2G12AQ9BZM1 189 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 C20orf27Q9GZN8 174 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 NUAK2Q9H093 628 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 MMADHCQ9H3L0 296 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 CCDC134Q9H6E4 229 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 BEX1Q9HBH7 125 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 TMBIM4Q9HC24 238 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 PLEK2Q9NYT0 353 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 VAPAQ9P0L0 249 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 SEC14L4Q9UDX3 406 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 IL20RAQ9UHF4 553 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 RIMS3Q9UJD0 308 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 RPS6KA6Q9UK32 745 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 NUP50Q9UKX7 468 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 TMCC3Q9ULS5 477 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 UBE2J1Q9Y385 318 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 FAM96BQ9Y3D0 163 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 WIPI2Q9Y4P8 454 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 PPIAL4AQ9Y536 164 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 NPTNQ9Y639 398 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 CAPN7Q9Y6W3 813 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ABCA1O95477 2261 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 RAI1Q7Z5J4 1906 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 A0A1B0GUS0 222 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 ELOVL7A1L3X0 281 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR6C6A6NF89 314 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 LRRN3E7EW58 273 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 M0QZ24 198 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 MRASO14807 208 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 SGCEO43556 437 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 AHCYL1O43865 530 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 TPST1O60507 370 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 CCDC22O60826 627 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 KHDRBS3O75525 346 aaKnown RBP3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 TRMUO75648 421 aaKnown RBP3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 ACTL6BO94805 426 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 SLC2A10O95528 541 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 CLPTM1O96005 669 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 PAHP00439 452 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 HPRP00739 348 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 IGHV3-13P01766 116 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 IGFBP1P08833 259 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 CST2P09228 141 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 PGA4P0DJD7 388 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 PGA3P0DJD8 388 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 ZNF250P15622 560 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 ZNF32P17041 273 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 ADRA2CP18825 462 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 EEF1B2P24534 225 aaKnown RBP3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 LAP3P28838 519 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 CRABP1P29762 137 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 IL2RGP31785 369 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 GRK5P34947 590 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 GGT2P36268 569 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 MDH2P40926 338 aaKnown RBP3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 AQP2P41181 271 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 SLC9A3P48764 834 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 P2RY4P51582 365 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 MNAT1P51948 309 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 RPL27P61353 136 aaKnown RBP3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 BTG1P62324 171 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 EGR4Q05215 589 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 RPL18Q07020 188 aaKnown RBP3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 SRSF4Q08170 494 aaKnown RBP3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 SF3A3Q12874 501 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR8B8Q15620 311 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 SNCBQ16143 134 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 DUSP7Q16829 419 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 TIGD6Q17RP2 521 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 CYBRD1Q53TN4 286 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 RUNDC3AQ59EK9 446 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 FGD3Q5JSP0 725 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 ELFN2Q5R3F8 820 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 PHYHD1Q5SRE7 291 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 FAM27BQ5VT28 67 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 METTL11BQ5VVY1 283 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 LINGO2Q7L985 606 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 MRPL21Q7Z2W9 205 aaKnown RBP3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 C1QL2Q7Z5L3 287 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 LRP11Q86VZ4 500 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 RNF113BQ8IZP6 322 aaKnown RBP3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 FTMTQ8N4E7 242 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 CLDN22Q8N7P3 220 aa3.18□□□□□ -1.9
HMGN1P11-201ENST00000508668 GJC3Q8NFK1 279 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms