RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ZNF33AQ06730 810 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 TCP10Q12799 353 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 IFT88Q13099 833 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZNF79Q15937 498 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 DEFB115Q30KQ5 88 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 TTLL9Q3SXZ7 439 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 RNF212Q495C1 297 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 AADACL4Q5VUY2 407 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 CST9Q5W186 159 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZNF493Q6ZR52 646 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 USP50Q70EL3 339 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 ABHD13Q7L211 337 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 OR10J6PQ8NGY7 276 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 ACTRT1Q8TDG2 376 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 GIMAP1Q8WWP7 306 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 RAB1CQ92928 201 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 IL22RA2Q969J5 263 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 APH1AQ96BI3 265 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 NRTNQ99748 197 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 MICU1Q9BPX6 476 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 NANOGQ9H9S0 305 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 ABCB10Q9NRK6 738 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 DEC1Q9P2X7 70 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 TRMT112Q9UI30 125 aaKnown RBP3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZNF225Q9UK10 706 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 DDX19BQ9UMR2 479 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 KCNE3Q9Y6H6 103 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 CIB4A0PJX0 185 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 XRCC2O43543 280 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 GNAO1P09471 354 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZDHHC11BP0C7U3 371 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 PNMA6AP0CW24 399 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 MAS1LP35410 378 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 PSMD4P55036 377 aaKnown RBP3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 LCN2P80188 198 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 SEMG2Q02383 582 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 UNC119Q13432 240 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 PSG5Q15238 335 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 RPEL1Q2QD12 228 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 HNRNPA1L2Q32P51 320 aaKnown RBP3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 TPTE2P1Q5T6R2 138 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 ULK3Q6PHR2 472 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 STRADAQ7RTN6 431 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZNF584Q8IVC4 421 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZFP41Q8N8Y5 198 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 TMEM104Q8NE00 496 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 OR4S2Q8NH73 311 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 RDH5Q92781 318 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 COL21A1Q96P44 957 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 FOXC2Q99958 501 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 XKR8Q9H6D3 395 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 TP53TG5Q9Y2B4 290 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 BRCA2P51587 3418 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 MYH13Q9UKX3 1938 aa3.66□□□□□ -1.82
HMGB1P3-201ENST00000502802 TRAV6A0A075B6T7 132 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 LOC100653049A0A140TA62 436 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 K7EMT4 169 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 KRT34O76011 436 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 CCDC172P0C7W6 258 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 OR5H8P0DN80 308 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 RAB3BP20337 219 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 CSNK1DP48730 415 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 STK38Q15208 465 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 KRTAP27-1Q3LI81 207 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 PTPN20Q4JDL3 420 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 NPSR1Q6W5P4 371 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNF547Q8IVP9 402 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 FBXO36Q8NEA4 188 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 CD300LFQ8TDQ1 290 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 TMEM230Q96A57 120 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 SIKE1Q9BRV8 207 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 DEFB129Q9H1M3 183 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 CD209Q9NNX6 404 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 PRSS16Q9NQE7 514 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 PRR34Q9NV39 138 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNF282Q9UDV7 671 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 TP53TG3Q9ULZ0 132 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 BZW2Q9Y6E2 419 aaKnown RBP3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 SMAD5-AS1Q9Y6J3 95 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 LAMB1P07942 1786 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 ADGRA3Q8IWK6 1321 aa3.65□□□□□ -1.83
HMGB1P3-201ENST00000502802 RTL9Q8NET4 1388 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 AGRNO00468 2067 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 AK9Q5TCS8 1911 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 PLPP1O14494 284 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 SUPT3HO75486 399 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 PCCAP05165 728 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 DCNP07585 359 aaKnown RBP3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNF19P17023 458 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 RCC1P18754 421 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 GGT1P19440 569 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 CSNK2A2P19784 350 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 PMCHP20382 165 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 PTNP21246 168 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 NMUP48645 174 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 CCNG1P51959 295 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 SLC7A9P82251 487 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 HMGCS1Q01581 520 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 PSG7Q13046 419 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms