RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 PLBD1Q6P4A8 553 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 MOGAT3Q86VF5 341 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 RFLNBQ8N5W9 214 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 ZNF454Q8N9F8 522 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 OR4Q3Q8NH05 313 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 ZNF418Q8TF45 676 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-232ENST00000489053 THEM6Q8WUY1 208 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 C1orf159Q96HA4 380 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 MAP6Q96JE9 813 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 MEGF10Q96KG7 1140 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 KCNJ15Q99712 375 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 MDFIQ99750 246 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 ADAT1Q9BUB4 502 aaKnown RBP7.72□□□□□ -1.17
HDAC6-232ENST00000489053 RBM4Q9BWF3 364 aaKnown RBP7.72□□□□□ -1.17
HDAC6-232ENST00000489053 OR10A2Q9H208 303 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 TOR3AQ9H497 397 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 MED20Q9H944 212 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 FN3KRPQ9HA64 309 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 PAPOLBQ9NRJ5 636 aaKnown RBP7.72□□□□□ -1.17
HDAC6-232ENST00000489053 H2AFY2Q9P0M6 372 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-232ENST00000489053 DNHD1Q96M86 4753 aa7.71□□□□□ -1.17
HDAC6-232ENST00000489053 hCG_1807616A0A1W2PRN6 198 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 A6NLC8 198 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 CD300LBA8K4G0 201 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 GSC2O15499 205 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 TIPRLO75663 272 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 HLA-DPB1P04440 258 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 CLUP10909 449 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 SLC2A1P11166 492 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 FCGR1AP12314 374 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 CA6P23280 308 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 FASP25445 335 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 MMP16P51512 607 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 TMEM155Q4W5P6 130 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 LYPD4Q6UWN0 246 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 RBMS3Q6XE24 437 aaKnown RBP7.71□□□□□ -1.18
HDAC6-232ENST00000489053 Q6ZR03 302 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 DPY19L4Q7Z388 723 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 BPIFB2Q8N4F0 458 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 BOLLQ8N9W6 283 aaKnown RBP7.71□□□□□ -1.18
HDAC6-232ENST00000489053 SPERTQ8NA61 448 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 OR52H1Q8NGJ2 320 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 OR8S1Q8NH09 359 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 SPATA3Q8NHX4 192 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 ZMYND19Q96E35 227 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-232ENST00000489053 NRBF2Q96F24 287 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 PGAM5Q96HS1 289 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 JMJD8Q96S16 334 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 SLC30A2Q9BRI3 323 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 MRI1Q9BV20 369 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 REPIN1Q9BWE0 567 aaKnown RBP7.71□□□□□ -1.18
HDAC6-232ENST00000489053 MMADHCQ9H3L0 296 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-232ENST00000489053 C7orf69Q9H7B7 122 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 GCM1Q9NP62 436 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 BRD7Q9NPI1 651 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 KRT84Q9NSB2 600 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 DDX28Q9NUL7 540 aaKnown RBP7.71□□□□□ -1.18
HDAC6-232ENST00000489053 UFSP2Q9NUQ7 469 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 C14orf119Q9NWQ9 140 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 DNAJC27Q9NZQ0 273 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 LAMP5Q9UJQ1 280 aa7.71□□□□□ -1.18
HDAC6-232ENST00000489053 PPIAL4EA0A075B759 164 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 TCRBV3S1A0A5B6 114 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 PPIAL4DF5H284 164 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 G3V2T6 193 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 TMEM178BH3BS89 294 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 PRODHO43272 600 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 GMDSO60547 372 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 CYB5R3P00387 301 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-232ENST00000489053 IGHV2-70P01814 119 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 LYNP07948 512 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 PPIAL4FP0DN26 164 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 PRKACGP22612 351 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 FPR2P25090 351 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 DDOSTP39656 456 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 NAA10P41227 235 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-232ENST00000489053 PRSS12P56730 875 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 BNIP1Q12981 228 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 ZMYND11Q15326 602 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 OR8B8Q15620 311 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 SNAI3Q3KNW1 292 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 ARMCX4Q5H9R4 360 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 TMEM255AQ5JRV8 349 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 TEX30Q5JUR7 227 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 SLC35D3Q5M8T2 416 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 GLYATL3Q5SZD4 288 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 BTNL3Q6UXE8 466 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 COLCA1Q6ZS62 124 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 CCDC121Q6ZUS5 278 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 FAM57BQ71RH2 274 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 KRT77Q7Z794 578 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 COMMD2Q86X83 199 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 KLBQ86Z14 1044 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 ZDHHC13Q8IUH4 622 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 OR8B3Q8NGG8 313 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 OR2AE1Q8NHA4 323 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF420Q8TAQ5 688 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-232ENST00000489053 NANPQ8TBE9 248 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 FAM81AQ8TBF8 368 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 ERGIC1Q969X5 290 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 196.1 ms