RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 GJC3Q8NFK1 279 aa6.24□□□□□ -1.41
PDPN-205ENST00000487038 OR4D11Q8NGI4 311 aa6.24□□□□□ -1.41
PDPN-205ENST00000487038 SPDL1Q96EA4 605 aa6.24□□□□□ -1.41
PDPN-205ENST00000487038 ZNF570Q96NI8 536 aa6.24□□□□□ -1.41
PDPN-205ENST00000487038 PAIP2Q9BPZ3 127 aaKnown RBP6.24□□□□□ -1.41
PDPN-205ENST00000487038 METTL8Q9H825 291 aaKnown RBP6.24□□□□□ -1.41
PDPN-205ENST00000487038 THAP1Q9NVV9 213 aa6.24□□□□□ -1.41
PDPN-205ENST00000487038 C14orf119Q9NWQ9 140 aa6.24□□□□□ -1.41
PDPN-205ENST00000487038 DNAJB11Q9UBS4 358 aa6.24□□□□□ -1.41
PDPN-205ENST00000487038 ZMAT5Q9UDW3 170 aaKnown RBP6.24□□□□□ -1.41
PDPN-205ENST00000487038 PRPF19Q9UMS4 504 aaKnown RBP6.24□□□□□ -1.41
PDPN-205ENST00000487038 A0A1W2PQ09 198 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 NKX6-3A6NJ46 265 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 M0R1W7 72 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 RER1O15258 196 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 PTBP3O95758 552 aaKnown RBP6.23□□□□□ -1.41
PDPN-205ENST00000487038 IFI30P13284 250 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 MUC1P15941 1255 aaPredicted RBP6.23□□□□□ -1.41
PDPN-205ENST00000487038 CA6P23280 308 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 RPL4P36578 427 aaKnown RBP6.23□□□□□ -1.41
PDPN-205ENST00000487038 SLC9A3P48764 834 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 GSK3BP49841 420 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 HOXA4Q00056 320 aaPredicted RBP6.23□□□□□ -1.41
PDPN-205ENST00000487038 EGFEM1PQ0D2K5 195 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 TSPYL5Q86VY4 417 aaPredicted RBP6.23□□□□□ -1.41
PDPN-205ENST00000487038 GLB1L2Q8IW92 636 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 GCSAMQ8N6F7 178 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 OR5D13Q8NGL4 314 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 C8orf46Q8TAG6 207 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 H1FXQ92522 213 aaKnown RBP6.23□□□□□ -1.41
PDPN-205ENST00000487038 SLCO4A1Q96BD0 722 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 C12orf43Q96C57 262 aaKnown RBP6.23□□□□□ -1.41
PDPN-205ENST00000487038 BPIFA2Q96DR5 249 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 MEGF9Q9H1U4 602 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 IKZF5Q9H5V7 419 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 RERGLQ9H628 205 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 SERTAD4Q9NUC0 356 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 CCDC167Q9P0B6 97 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 SLAMF8Q9P0V8 285 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 RPS6KA6Q9UK32 745 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 PITPNC1Q9UKF7 332 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 BAG5Q9UL15 447 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 SH3GLB1Q9Y371 365 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 SF3B6Q9Y3B4 125 aaKnown RBP6.23□□□□□ -1.41
PDPN-205ENST00000487038 PCDHGB5Q9Y5G0 923 aa6.23□□□□□ -1.41
PDPN-205ENST00000487038 IGHV3OR15-7A0A075B7D8 119 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 TRAV27A0A087WT01 109 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 TRBV5-3A0A0A0MS03 114 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 A0A1W2PRX2 142 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 PRSS37A4D1T9 235 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 ADARB2-AS1A8MUL3 147 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 RGS16O15492 202 aaPredicted RBP6.22□□□□□ -1.41
PDPN-205ENST00000487038 KHDRBS3O75525 346 aaKnown RBP6.22□□□□□ -1.41
PDPN-205ENST00000487038 GLCEO94923 617 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 LCATP04180 440 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 GRPP07492 148 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 CTLA4P16410 223 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 LMO1P25800 156 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 VDAC2P45880 294 aaPredicted RBP6.22□□□□□ -1.41
PDPN-205ENST00000487038 MRPL19P49406 292 aaKnown RBP6.22□□□□□ -1.41
PDPN-205ENST00000487038 PRSS12P56730 875 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 PRB3Q04118 309 aaPredicted RBP6.22□□□□□ -1.41
PDPN-205ENST00000487038 ST3GAL3Q11203 375 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 IKZF1Q13422 519 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 PCK2Q16822 640 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 KRT71Q3SY84 523 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 MESTQ5EB52 335 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 RABL3Q5HYI8 236 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 WDR38Q5JTN6 314 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 PAGE3Q5JUK9 113 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 DNM1P34Q6PK57 102 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 CRIP3Q6Q6R5 217 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 BLOC1S3Q6QNY0 202 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 COLCA1Q6ZS62 124 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 RNF144BQ7Z419 303 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 OAFQ86UD1 273 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 PNKDQ8N490 385 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 Q8N7P7 452 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 OR52B2Q96RD2 323 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 DDOQ99489 341 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 CCL13Q99616 98 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 ATF6BQ99941 703 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 CDCA4Q9BXL8 241 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 PRSS22Q9GZN4 317 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 DNTTIP1Q9H147 329 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 ZNF702PQ9H963 129 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 KCNK9Q9NPC2 374 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 MRPL15Q9P015 296 aaKnown RBP6.22□□□□□ -1.41
PDPN-205ENST00000487038 RIMS3Q9UJD0 308 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 CSMD3Q7Z407 3707 aa6.22□□□□□ -1.41
PDPN-205ENST00000487038 HYDINQ4G0P3 5121 aa6.21□□□□□ -1.41
PDPN-205ENST00000487038 GGT3PA6NGU5 568 aa6.21□□□□□ -1.42
PDPN-205ENST00000487038 EFCAB9A8MZ26 197 aa6.21□□□□□ -1.42
PDPN-205ENST00000487038 H0YAE9 185 aa6.21□□□□□ -1.42
PDPN-205ENST00000487038 F2RL2O00254 374 aa6.21□□□□□ -1.42
PDPN-205ENST00000487038 BHLHE40O14503 412 aa6.21□□□□□ -1.42
PDPN-205ENST00000487038 ANGPTL7O43827 346 aa6.21□□□□□ -1.42
PDPN-205ENST00000487038 CHST1O43916 411 aa6.21□□□□□ -1.42
PDPN-205ENST00000487038 SLC16A7O60669 478 aa6.21□□□□□ -1.42
PDPN-205ENST00000487038 SNNO75324 88 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms