RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 NIPAL2Q9H841 368 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 TBCCD1Q9NVR7 557 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 FAM206AQ9NX38 181 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 ZNF319Q9P2F9 582 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 MYEF2Q9P2K5 600 aaKnown RBP11.37□□□□□ -0.59
HDAC1-208ENST00000482310 OR52A1Q9UKL2 312 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 LRRC42Q9Y546 428 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 ANKRD17O75179 2603 aaKnown RBP11.37□□□□□ -0.59
HDAC1-208ENST00000482310 APCP25054 2843 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 E9PI62 339 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 SRSF10O75494 262 aaKnown RBP11.36□□□□□ -0.59
HDAC1-208ENST00000482310 SULT1C4O75897 302 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 APOC1P02654 83 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 MT-ND5P03915 603 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 HTR1AP08908 422 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 TACSTD2P09758 323 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 SERPINF1P36955 418 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 GTF2A1P52655 376 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-208ENST00000482310 KLF3P57682 345 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-208ENST00000482310 ZNF92Q03936 586 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 ZNF718Q3SXZ3 478 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 TMEM255AQ5JRV8 349 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 ZNF684Q5T5D7 378 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 DEGS2Q6QHC5 323 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 UNQ6126/PRO20091Q6UXV3 157 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 TMPRSS11AQ6ZMR5 421 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 MUC15Q8N387 334 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 BHLHE23Q8NDY6 225 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 SYNPRQ8TBG9 265 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 KLF14Q8TD94 323 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-208ENST00000482310 GTF3AQ92664 365 aaKnown RBP11.36□□□□□ -0.59
HDAC1-208ENST00000482310 CMBLQ96DG6 245 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 PELI1Q96FA3 418 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 REEP6Q96HR9 211 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 FAM71F1Q96KD3 344 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-208ENST00000482310 SOX7Q9BT81 388 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 JAM3Q9BX67 310 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 PLK3Q9H4B4 646 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 PLEKHF2Q9H8W4 249 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 LAMP3Q9UQV4 416 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 LRCH1Q9Y2L9 728 aa11.36□□□□□ -0.59
HDAC1-208ENST00000482310 P2RY10O00398 339 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 TIMM8AO60220 97 aaPredicted RBP11.35□□□□□ -0.59
HDAC1-208ENST00000482310 SOD3P08294 240 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 APOBEC3AP31941 199 aaPredicted RBP11.35□□□□□ -0.59
HDAC1-208ENST00000482310 TTKP33981 857 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 ALDH3B1P43353 468 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 KIR3DL2P43630 455 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 GBX2P52951 348 aaPredicted RBP11.35□□□□□ -0.59
HDAC1-208ENST00000482310 DOC2BQ14184 412 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 GK2Q14410 553 aaPredicted RBP11.35□□□□□ -0.59
HDAC1-208ENST00000482310 NKPD1Q17RQ9 610 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 WDR38Q5JTN6 314 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 XAF1Q6GPH4 301 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 OR2T2Q6IF00 324 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 PGAP1Q75T13 922 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 RHOUQ7L0Q8 258 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 PRSS45Q7RTY3 260 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 CATSPERDQ86XM0 798 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 PRSS35Q8N3Z0 413 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 OR51E1Q8TCB6 317 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 MRPL24Q96A35 216 aaKnown RBP11.35□□□□□ -0.59
HDAC1-208ENST00000482310 MARS2Q96GW9 593 aaKnown RBP11.35□□□□□ -0.59
HDAC1-208ENST00000482310 CCL19Q99731 98 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 MND1Q9BWT6 205 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 DUSP21Q9H596 190 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 ZNF442Q9H7R0 627 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 G6PC2Q9NQR9 355 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 FAIMQ9NVQ4 179 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 TAAR3PQ9P1P4 343 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 ERGIC3Q9Y282 383 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 PLEKHA6Q9Y2H5 1048 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 CAB39Q9Y376 341 aaPredicted RBP11.35□□□□□ -0.59
HDAC1-208ENST00000482310 SNX5Q9Y5X3 404 aa11.35□□□□□ -0.59
HDAC1-208ENST00000482310 GGT3PA6NGU5 568 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 VSTM5A8MXK1 200 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 LALBAP00709 142 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 TTRP02766 147 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 CDKN1AP38936 164 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 CHN2P52757 468 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 SELENOVP59797 346 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 NANOS3P60323 173 aaKnown RBP11.34□□□□□ -0.59
HDAC1-208ENST00000482310 GABARAPL2P60520 117 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 MED22Q15528 200 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 ZNF544Q6NX49 715 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 COLCA1Q6ZS62 124 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 RDH10Q8IZV5 341 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 SYS1Q8N2H4 156 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 OR52H1Q8NGJ2 320 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 OR52N1Q8NH53 320 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 SGK3Q96BR1 496 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 LYZL4Q96KX0 146 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 OR5M11Q96RB7 305 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 MYCBPQ99417 103 aaPredicted RBP11.34□□□□□ -0.59
HDAC1-208ENST00000482310 TPK1Q9H3S4 243 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 SP140LQ9H930 580 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 DYNLRB1Q9NP97 96 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 GPR84Q9NQS5 396 aa11.34□□□□□ -0.59
HDAC1-208ENST00000482310 TMEM129A0AVI4 362 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 A6NIN4 97 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms