RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 HIST1H1CP16403 213 aaKnown RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 GABRB3P28472 473 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 CEACAM8P31997 349 aaPredicted RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 ERVK11-1P61568 191 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 ODF4Q2M2E3 257 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 TIGD3Q6B0B8 471 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 ZCCHC23Q6ZST2 131 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 MDGA1Q8NFP4 955 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 CDX2Q99626 313 aaPredicted RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 S1PR5Q9H228 398 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 PAM16Q9Y3D7 125 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 INTS1Q8N201 2190 aaKnown RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 SETBP1Q9Y6X0 1596 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 MAGP20916 626 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 IVDP26440 423 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 PRDX2P32119 198 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 SNU13P55769 128 aaKnown RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 GSG1Q2KHT4 349 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 JMJD6Q6NYC1 403 aaPredicted RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 Q6ZTK2 550 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 AAED1Q7RTV5 226 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 NFAM1Q8NET5 270 aaPredicted RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 CMBLQ96DG6 245 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 C1QTNF2Q9BXJ5 285 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 ADAMTS5Q9UNA0 930 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 LOC100289279A0A1B0GTE1 492 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 SLC25A17O43808 307 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 PMP2P02689 132 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 HLA-DQB2P05538 268 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 ACRV1P26436 265 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 NKX2-1P43699 371 aaPredicted RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 ZNF260Q3ZCT1 412 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 FCRL6Q6DN72 434 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 CFAP161Q6P656 301 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 GALNT16Q8N428 558 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 SH2D2AQ9NP31 389 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 GPATCH2LQ9NWQ4 482 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 PDE4DIPQ5VU43 2346 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 KDM4EB2RXH2 506 aaPredicted RBP4.96□□□□□ -1.61
USF3-202ENST00000478658 CTNSO60931 367 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 EEDO75530 441 aaKnown RBP4.96□□□□□ -1.61
USF3-202ENST00000478658 LEFTY1O75610 366 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 MELTFP08582 738 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 INAFM2P0DMQ5 153 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 SDHAP31040 664 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 UCP2P55851 309 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 RAB38P57729 211 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 MRPS21P82921 87 aaKnown RBP4.96□□□□□ -1.61
USF3-202ENST00000478658 TAZQ16635 292 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 ZNF793Q6ZN11 406 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 ZFAND4Q86XD8 727 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 PLPP7Q8NBV4 271 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 SH3RF2Q8TEC5 729 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 RPEQ96AT9 228 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 SLC45A3Q96JT2 553 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 ONECUT1Q9UBC0 465 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 UFC1Q9Y3C8 167 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 AKAP12Q02952 1782 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 MASP2O00187 686 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 MBPP02686 304 aaPredicted RBP4.96□□□□□ -1.61
USF3-202ENST00000478658 INHBBP09529 407 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 PGA3P0DJD8 388 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 CCR5P51681 352 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 CXCR4P61073 352 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 MFAP5Q13361 173 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 OR2B11Q5JQS5 317 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 FAM3CQ92520 227 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 TFAP2CQ92754 450 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 DEFB118Q96PH6 123 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 ZFYVE21Q9BQ24 234 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 WDR76Q9H967 626 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 PARD6AQ9NPB6 346 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 ADAMTS12P58397 1594 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 IFT172Q9UG01 1749 aa4.96□□□□□ -1.61
USF3-202ENST00000478658 H3BML4 177 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 B3GALT4O96024 378 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 CRPP02741 224 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 RPLP1P05386 114 aaKnown RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 PRDX5P30044 214 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 APOBEC1P41238 236 aaKnown RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 HAAOP46952 286 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 NUMBP49757 651 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 FHITP49789 147 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 LRRC75BQ2VPJ9 315 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 SUSD4Q5VX71 490 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 CRTC1Q6UUV9 634 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 DBF4BQ8NFT6 615 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 MRGPRDQ8TDS7 321 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 MKRN2Q9H000 416 aaKnown RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 FGF21Q9NSA1 209 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 NDUFB11Q9NX14 153 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 AGLP35573 1532 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 LMTK2Q8IWU2 1503 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 DUXBA0A1W2PPF3 345 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 TNFRSF6BO95407 300 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 FTH1P19P0C7X4 201 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 OSMP13725 252 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 SLC9A3R2Q15599 337 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 PNLIPRP3Q17RR3 467 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 C22orf39Q6P5X5 142 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms