RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ARL14EPQ8N8R7 260 aaPredicted RBP12.37□□□□□ -0.43
HDAC1-206ENST00000476391 OR52E1Q8NGJ3 308 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 NPRL2Q8WTW4 380 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 TMEM230Q96A57 120 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 SNX22Q96L94 193 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 PTPN18Q99952 460 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 AICDAQ9GZX7 198 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 OR2AG1Q9H205 316 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 CKLFQ9UBR5 152 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 ABT1Q9ULW3 272 aaKnown RBP12.37□□□□□ -0.43
HDAC1-206ENST00000476391 A0A087WV62 115 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 BORCS7-ASMTA0A0B4J1R7 106 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 TMEM210A6NLX4 147 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 CDRT15L2A8MXV6 281 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 PRH1P02810 166 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 OR3A1P47881 315 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 SPEM2Q0P670 501 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 SLC9A3R2Q15599 337 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 LDLRAD1Q5T700 205 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 ASPHD2Q6ICH7 369 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 TMEM104Q8NE00 496 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 TVP23CQ96ET8 276 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 GINS3Q9BRX5 216 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 C5orf66Q9H5L9 145 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 DKKL1Q9UK85 242 aa12.37□□□□□ -0.43
HDAC1-206ENST00000476391 THSD7BQ9C0I4 1608 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 A0A1B0GWA3 101 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 B4DEV8 164 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 HSD17B6O14756 317 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF264O43296 627 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 THEGLP0DJG4 465 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 FOLR1P15328 257 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 CD70P32970 193 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 TMEM225Q6GV28 225 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 FDX2Q6P4F2 183 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 SLC35G3Q8N808 338 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 SMARCD2Q92925 531 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 SCGB3A2Q96PL1 93 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 GSKIPQ9P0R6 139 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 MYOTQ9UBF9 498 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 MRPS18BQ9Y676 258 aaKnown RBP12.36□□□□□ -0.43
HDAC1-206ENST00000476391 HEATR5AQ86XA9 2040 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 FAM171A2A8MVW0 826 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 FTCDNL1E5RQL4 147 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 H3BSH0 61 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 APODP05090 189 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 PNLIPP16233 465 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 IQCJQ1A5X6 159 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 ANKRD55Q3KP44 614 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 COA6Q5JTJ3 125 aaKnown RBP12.36□□□□□ -0.43
HDAC1-206ENST00000476391 WDR38Q5JTN6 314 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 DMRTA1Q5VZB9 504 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 SLC35E3Q7Z769 313 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 OR51A2Q8NGJ7 313 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 OR2L8Q8NGY9 312 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 CMKLR1Q99788 373 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 OR8D2Q9GZM6 311 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 CBLN4Q9NTU7 201 aa12.36□□□□□ -0.43
HDAC1-206ENST00000476391 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.36□□□□□ -0.43
HDAC1-206ENST00000476391 TCF20Q9UGU0 1960 aaKnown RBP12.35□□□□□ -0.43
HDAC1-206ENST00000476391 MEGF11A6BM72 1044 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 TRDCB7Z8K6 153 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 NFKBIEO00221 500 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 CDC14BO60729 498 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF217O75362 1048 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 DEDDO75618 318 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 ABLIM3O94929 683 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 RPLP2P05387 115 aaKnown RBP12.35□□□□□ -0.43
HDAC1-206ENST00000476391 SLC35G4P0C7Q5 338 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 PGA4P0DJD7 388 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 PGA5P0DJD9 388 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 HMGA1P17096 107 aaKnown RBP12.35□□□□□ -0.43
HDAC1-206ENST00000476391 FSTP19883 344 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 FHITP49789 147 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 COL9A2Q14055 689 aaPredicted RBP12.35□□□□□ -0.43
HDAC1-206ENST00000476391 HERPUD1Q15011 391 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 TANGO2Q6ICL3 276 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 Q6ZVU0 165 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 OR5AR1Q8NGP9 310 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 FIBINQ8TAL6 211 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 WFIKKN2Q8TEU8 576 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 TAAR8Q969N4 342 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 RASD2Q96D21 266 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 LINC00615Q96LM1 132 aaPredicted RBP12.35□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF558Q96NG5 402 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 PRRX2Q99811 253 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 SYT3Q9BQG1 590 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 TMEM242Q9NWH2 141 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 FLRT3Q9NZU0 649 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 CXXC1Q9P0U4 656 aaPredicted RBP12.35□□□□□ -0.43
HDAC1-206ENST00000476391 FOXD3Q9UJU5 478 aaPredicted RBP12.35□□□□□ -0.43
HDAC1-206ENST00000476391 SPTBP11277 2137 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 LNP1A1A4G5 178 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 MASP2O00187 686 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 ERI3O43414 337 aaKnown RBP12.35□□□□□ -0.43
HDAC1-206ENST00000476391 GNALP38405 381 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 P2RY1P47900 373 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 RND2P52198 227 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 SUPT4H1P63272 117 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms