RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 KPTNQ9Y664 436 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 STARD9Q9P2P6 4700 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 TRAV38-1A0A0B4J264 116 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 A0A1B0GVI7 797 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 TMEM238LA0A1B0GVL6 79 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 HTR3EA5X5Y0 456 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 ANKRD61A6NGH8 418 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 OOEPA6NGQ2 149 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 XKRYO14609 159 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 DVL1O14640 695 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 IMPA2O14732 288 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 NDUFA2O43678 99 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 AHCYL1O43865 530 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 XPNPEP2O43895 674 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 ECDO95905 644 aaPredicted RBP4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 GYPAP02724 150 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 PF4P02776 101 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 CD14P08571 375 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 IFI30P13284 250 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 ZNF26P17031 533 aaPredicted RBP4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 SAA4P35542 130 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 OR1E2P47887 323 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 GZMMP51124 257 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 DLX1P56177 255 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 HIST1H3AP68431 136 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 PRB3Q04118 309 aaPredicted RBP4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 KRR1Q13601 381 aaKnown RBP4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 GK2Q14410 553 aaPredicted RBP4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 OR8B8Q15620 311 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 KRTAP27-1Q3LI81 207 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 ANKDD1AQ495B1 522 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 C4orf46Q504U0 113 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 BEND6Q5SZJ8 279 aaPredicted RBP4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 HIST2H3PS2Q5TEC6 136 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 C11orf87Q6NUJ2 197 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 METAP1DQ6UB28 335 aaPredicted RBP4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 C1orf122Q6ZSJ8 110 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 HIST2H3AQ71DI3 136 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 OAFQ86UD1 273 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 FAM90A1Q86YD7 464 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 GLB1L2Q8IW92 636 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 NRMQ8IXM6 262 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 LILRB2Q8N423 598 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 FGFRL1Q8N441 504 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 KLHDC1Q8N7A1 406 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 LY6G5BQ8NDX9 201 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 OR13C2Q8NGS9 318 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 OR10A6Q8NH74 314 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 OR5R1Q8NH85 324 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 PPP1R35Q8TAP8 253 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 ST8SIA4Q92187 359 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 SGCDQ92629 289 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 PHF21AQ96BD5 680 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 Q96M85 177 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 C7orf26Q96N11 449 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 ZNF570Q96NI8 536 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 COQ7Q99807 217 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 ADAT1Q9BUB4 502 aaKnown RBP4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 CCDC28BQ9BUN5 200 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 HDHD2Q9H0R4 259 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 SYT4Q9H2B2 425 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 PPA2Q9H2U2 334 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 CNTD2Q9H8S5 307 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 TRIM36Q9NQ86 728 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 ONECUT1Q9UBC0 465 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 GRHPRQ9UBQ7 328 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 BAG5Q9UL15 447 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 A4GNTQ9UNA3 340 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 COA3Q9Y2R0 106 aaPredicted RBP4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 CAB39Q9Y376 341 aaPredicted RBP4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 LHFPL6Q9Y693 200 aa4.2□□□□□ -1.74
SNRNP40-204ENST00000474025 PLECQ15149 4684 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 TENM2Q9NT68 2774 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 A0A1B0GW55 424 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 MEIOCA2RUB1 952 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 MEGF11A6BM72 1044 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 CD300LBA8K4G0 201 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 EFCAB9A8MZ26 197 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 CDC42EP2O14613 210 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 ANGPT2O15123 496 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 NPFFO15130 113 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 SLC16A7O60669 478 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 KHDRBS3O75525 346 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 PAHP00439 452 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 LHBP01229 141 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 ACSM4P0C7M7 580 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 DUX4L2P0CJ85 424 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 DUX4L3P0CJ86 424 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 DUX4L4P0CJ87 422 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 DUX4L5P0CJ88 424 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 DUX4L6P0CJ89 424 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 DUX4L7P0CJ90 424 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 CA6P23280 308 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 SDHAP31040 664 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 RPL4P36578 427 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 KIR2DS4P43632 304 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 GPR4P46093 362 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 SLC9A3P48764 834 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 GYS2P54840 703 aa4.19□□□□□ -1.74
SNRNP40-204ENST00000474025 MAGOHP61326 146 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms