RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 NR4A1P22736 598 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 CD40P25942 277 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 LOXP28300 417 aaPredicted RBP5.13□□□□□ -1.59
USP39-213ENST00000467885 APLNRP35414 380 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 HTR5AP47898 357 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 CX3CR1P49238 355 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 ZNF83P51522 516 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 IDH3GP51553 393 aaPredicted RBP5.13□□□□□ -1.59
USP39-213ENST00000467885 SORDQ00796 357 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 FABP5Q01469 135 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 NAAAQ02083 359 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 ZNF92Q03936 586 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 SLC3A1Q07837 685 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 INSL4Q14641 139 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 DAZAP2Q15038 168 aaPredicted RBP5.13□□□□□ -1.59
USP39-213ENST00000467885 CDK5R1Q15078 307 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 TSTQ16762 297 aaKnown RBP5.13□□□□□ -1.59
USP39-213ENST00000467885 SNAI3Q3KNW1 292 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 ACSM3Q53FZ2 586 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 NCMAPQ5T1S8 102 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 SP5Q6BEB4 398 aaPredicted RBP5.13□□□□□ -1.59
USP39-213ENST00000467885 FAM57BQ71RH2 274 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 SSX8Q7RTT4 187 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 SATL1Q86VE3 508 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 ANKRD13BQ86YJ7 626 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 DMRTC2Q8IXT2 367 aaPredicted RBP5.13□□□□□ -1.59
USP39-213ENST00000467885 ZNF101Q8IZC7 436 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 MS4A15Q8N5U1 240 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 ZNF283Q8N7M2 679 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 SLC30A7Q8NEW0 376 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 OR8B12Q8NGG6 310 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 OR1J2Q8NGS2 313 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 OR14K1Q8NGZ2 314 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 OR10AC1Q8NH08 325 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 OR5AK2Q8NH90 309 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 OR51E1Q8TCB6 317 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 HAVCR2Q8TDQ0 301 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 RGP1Q92546 391 aaPredicted RBP5.13□□□□□ -1.59
USP39-213ENST00000467885 TMEM203Q969S6 136 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 SPSB4Q96A44 273 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 HAVCR1Q96D42 359 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 TRMT61AQ96FX7 289 aaKnown RBP5.13□□□□□ -1.59
USP39-213ENST00000467885 ZNF799Q96GE5 643 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 DACH2Q96NX9 599 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 PDCD1LG2Q9BQ51 273 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 FUNDC2Q9BWH2 189 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 NAA50Q9GZZ1 169 aaKnown RBP5.13□□□□□ -1.59
USP39-213ENST00000467885 OR51E2Q9H255 320 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 POFUT1Q9H488 388 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 BRD7Q9NPI1 651 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 NUFIP1Q9UHK0 495 aaKnown RBP5.13□□□□□ -1.59
USP39-213ENST00000467885 ZNF281Q9Y2X9 895 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 N6AMT1Q9Y5N5 214 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 RELNP78509 3460 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 RTTNQ86VV8 2226 aa5.13□□□□□ -1.59
USP39-213ENST00000467885 ESPL1Q14674 2120 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 TRBV5-5A0A0J9YX44 114 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 PNMA8CA0A1B0GUJ8 204 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 TRDV1A0A1B0GX56 115 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 LOC390937A0A1W2PQ73 354 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 FAM221AA4D161 298 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 ANKRD61A6NGH8 418 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 M0R1B8 84 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 P2RY10O00398 339 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 CCRL2O00421 344 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 TPD52L2O43399 206 aaKnown RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 GPRIN2O60269 458 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 LMX1BO60663 402 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 CCL1P22362 96 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 GALP22466 123 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 CCNOP22674 350 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 TUBG1P23258 451 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 GADD45AP24522 165 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 PTAFRP25105 342 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 PSMB9P28065 219 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 HSD11B1P28845 292 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 FGF9P31371 208 aaPredicted RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 TTKP33981 857 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 RAD52P43351 418 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 KIR2DL3P43628 341 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 TAS2R43P59537 309 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 PSMA6P60900 246 aaKnown RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 RPS25P62851 125 aaKnown RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 NKX6-1P78426 367 aaPredicted RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 FAM3AP98173 230 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 CTF1Q16619 201 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 MSMPQ1L6U9 139 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 TBC1D28Q2M2D7 210 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 ALKBH6Q3KRA9 238 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 TMEM255AQ5JRV8 349 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 GLYATL3Q5SZD4 288 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 TMEM244Q5VVB8 128 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 GPR107Q5VW38 600 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 ASPHD2Q6ICH7 369 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 ALKBH2Q6NS38 261 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 ARL9Q6T311 187 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 ZNF704Q6ZNC4 412 aaPredicted RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 SLC16A12Q6ZSM3 486 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 WFDC8Q8IUA0 241 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 KRTAP1-3Q8IUG1 177 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms