RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ZNF552Q9H707 407 aaPredicted RBP5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 CXorf36Q9H7Y0 433 aa5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 MOB1AQ9H8S9 216 aa5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 MTHFD2LQ9H903 347 aaPredicted RBP5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 CDH20Q9HBT6 801 aa5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZCCHC3Q9NUD5 404 aaKnown RBP5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 SOHLH2Q9NX45 425 aa5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 GSKIPQ9P0R6 139 aa5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 SLC23A2Q9UGH3 650 aa5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 FOXD3Q9UJU5 478 aaPredicted RBP5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF223Q9UK11 482 aaPredicted RBP5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 PADI1Q9ULC6 663 aa5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 C14orf166Q9Y224 244 aaKnown RBP5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 PIN4Q9Y237 131 aaKnown RBP5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 NTNG1Q9Y2I2 539 aa5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 PLXNA3P51805 1871 aa5.05□□□□□ -1.6
VTI1BP4-201ENST00000427516 XIRP1Q702N8 1843 aaKnown RBP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 TP53BP1Q12888 1972 aaPredicted RBP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 GREB1Q4ZG55 1949 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 TRAV30A0A087WSZ9 112 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 MYBPHLA2RUH7 354 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 MAP1LC3B2A6NCE7 125 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 CCDC85CA6NKD9 419 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 CPSF4LA6NMK7 179 aaKnown RBP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 C1QTNF3-AMACRE9PGA6 284 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 F6UZH7 168 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 NFKBIEO00221 500 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 GPR137BO60478 399 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 CNMDO75829 334 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 HPRT1P00492 218 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 KNG1P01042 644 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 F13BP05160 661 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 DBIP07108 87 aaKnown RBP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 PRSS56P0CW18 603 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 ATP1B2P14415 290 aaPredicted RBP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 PNLIPP16233 465 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 FSTP19883 344 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 GNRHRP30968 328 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 TLX1P31314 330 aaPredicted RBP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 CDKN1CP49918 316 aaPredicted RBP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 NPY4RP50391 375 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 RPS11P62280 158 aaKnown RBP eCLIP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 SRPXP78539 464 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 LCN2P80188 198 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 HSPB3Q12988 150 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 IL24Q13007 206 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 CRMP1Q14194 572 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 IL13RA2Q14627 380 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 CSRP2Q16527 193 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 UPP1Q16831 310 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF750Q32MQ0 723 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 MORN2Q502X0 79 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 FNDC3BQ53EP0 1204 aaKnown RBP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 MPPE1Q53F39 396 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 TP53I3Q53FA7 332 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 PDZD11Q5EBL8 140 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF506Q5JVG8 444 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 C9orf135Q5VTT2 229 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 LEG1Q6P5S2 330 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 VWA1Q6PCB0 445 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 DNM1P34Q6PK57 102 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 CLEC18BQ6UXF7 455 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 SLC39A5Q6ZMH5 540 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 MED25Q71SY5 747 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF627Q7L945 461 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 GDF7Q7Z4P5 450 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 SCD5Q86SK9 330 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF595Q8IYB9 648 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF100Q8IYN0 542 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 PRSS58Q8IYP2 241 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 C10orf53Q8N6V4 93 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 CYB561A3Q8NBI2 242 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 RCBTB1Q8NDN9 531 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR5L1Q8NGL2 311 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR5B3Q8NH48 314 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 GPR119Q8TDV5 335 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 TMEM170AQ8WVE7 144 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 TSEN15Q8WW01 171 aaKnown RBP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 CCDC74AQ96AQ1 378 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 RASD2Q96D21 266 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 ARSGQ96EG1 525 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 BOD1Q96IK1 185 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 ABHD14BQ96IU4 210 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 SPACA7Q96KW9 195 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 SUSD3Q96L08 255 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 LPAR4Q99677 370 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 PRRX2Q99811 253 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 KXD1Q9BQD3 176 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 LRFN3Q9BTN0 628 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 SPON2Q9BUD6 331 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 C20orf24Q9BUV8 137 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 MS4A8Q9BY19 250 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 MAP1LC3BQ9GZQ8 125 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 CSTL1Q9H114 145 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 SLC25A18Q9H1K4 315 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 SYNPO2LQ9H987 977 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 PELI2Q9HAT8 420 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 ELL3Q9HB65 397 aaPredicted RBP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 Q9N2K0 584 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 BPIFA1Q9NP55 256 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms