RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 OR5H15A6NDH6 313 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 CBY3A6NI87 242 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 LIPT2A6NK58 231 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 FAM90A7PA6NKC0 464 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 A6NL46 340 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 FAM90A22PA8MWA6 464 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 KIR3DP1A8MWS1 328 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 FAM90A12PA8MX19 464 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 FAM90A23PA8MXZ1 464 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 FTCDNL1E5RQL4 147 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 NPIPA2E9PIF3 369 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 NPIPA3F8WFD2 350 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 KLRC4-KLRK1H3BQV0 150 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 J3QLW9 94 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SULT2B1O00204 365 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 PLPP3O14495 311 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 TNFSF11O14788 317 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 PHYHO14832 338 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SELENOFO60613 162 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 NPIPB7O75200 414 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 NDUFS7O75251 213 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 AKR7A3O95154 331 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 WDPCPO95876 746 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 TXNDC12O95881 172 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 OPN1LWP04000 364 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SPARCP09486 303 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 NR2C1P13056 603 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF823P16415 610 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF19P17023 458 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF43P17038 809 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 IL11P20809 199 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 PSMA1P25786 263 aaKnown RBP3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 CRABP1P29762 137 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SOX6P35712 828 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 TGFBR2P37173 567 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 RGS6P49758 472 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 GBX2P52951 348 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 BLVRAP53004 296 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC25A1P53007 311 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 TAS2R43P59537 309 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 VBP1P61758 197 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 EFNB1P98172 346 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 HSF2Q03933 536 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZP4Q12836 540 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 MFAP5Q13361 173 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 GGTLC2Q14390 218 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 EFNB3Q15768 340 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ACKR1Q16570 336 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 DGUOKQ16854 277 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMEM176BQ3YBM2 270 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 GLYR1Q49A26 553 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ATP1A1-AS1Q5TC04 95 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 EEF1A1P5Q5VTE0 462 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 LIPKQ5VXJ0 399 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 RNLSQ5VYX0 342 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMEM225Q6GV28 225 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF544Q6NX49 715 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 PAQR6Q6TCH4 344 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 B3GLCTQ6Y288 498 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC35D2Q76EJ3 337 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 FAM122BQ7Z309 247 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 GALNTL5Q7Z4T8 443 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SMIM29Q86T20 159 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 YRDCQ86U90 279 aaKnown RBP3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 LHFPL3Q86UP9 236 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 PM20D2Q8IYS1 436 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 UBQLNLQ8IYU4 475 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 GTPBP8Q8N3Z3 284 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMEM99Q8N816 258 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZFP41Q8N8Y5 198 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 WDSUB1Q8N9V3 476 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMEM178AQ8NBL3 297 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 NPEPL1Q8NDH3 523 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 NOXO1Q8NFA2 376 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR2M7Q8NG81 312 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR13A1Q8NGR1 328 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZPLD1Q8TCW7 415 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 FGF11Q92914 225 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF524Q96C55 264 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ARL5BQ96KC2 179 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 C4orf36Q96KX1 117 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SIGLEC12Q96PQ1 595 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 INTS14Q96SY0 518 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 TEAD3Q99594 435 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 DOK1Q99704 481 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ALG12Q9BV10 488 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 HCAR1Q9BXC0 346 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR2B2Q9GZK3 357 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 DCSTAMPQ9H295 470 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SYT4Q9H2B2 425 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 TXNIPQ9H3M7 391 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SH2D2AQ9NP31 389 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ISYNA1Q9NPH2 558 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SNTG1Q9NSN8 517 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 NDUFB11Q9NX14 153 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 HAO2Q9NYQ3 351 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF69Q9UC07 566 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 CLEC2DQ9UHP7 191 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 LAMP5Q9UJQ1 280 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms