RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SORCS2Q96PQ0 1159 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 OR10A2Q9H208 303 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 CXXC4Q9H2H0 198 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 BARX1Q9HBU1 254 aaPredicted RBP16.41■□□□□ 0.22
HOXA9-202ENST00000396345 MRM2Q9UI43 246 aaKnown RBP16.41■□□□□ 0.22
HOXA9-202ENST00000396345 TMEM269A0A1B0GVZ9 245 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 PLSCR5A0PG75 271 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 METTL15A6NJ78 407 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 XRCC2O43543 280 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 ERCC1P07992 297 aaPredicted RBP16.4■□□□□ 0.22
HOXA9-202ENST00000396345 SELEP16581 610 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 LIPAP38571 399 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 ZNF92Q03936 586 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 ZNF829Q3KNS6 432 aaPredicted RBP16.4■□□□□ 0.22
HOXA9-202ENST00000396345 PLEKHG7Q6ZR37 379 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 MRPL21Q7Z2W9 205 aaKnown RBP16.4■□□□□ 0.22
HOXA9-202ENST00000396345 YIPF7Q8N8F6 280 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 OR2AE1Q8NHA4 323 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 FBLIM1Q8WUP2 373 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 GTF3AQ92664 365 aaKnown RBP16.4■□□□□ 0.22
HOXA9-202ENST00000396345 TPK1Q9H3S4 243 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 CYSLTR2Q9NS75 346 aa16.4■□□□□ 0.22
HOXA9-202ENST00000396345 CGGBP1Q9UFW8 167 aaPredicted RBP16.4■□□□□ 0.22
HOXA9-202ENST00000396345 AKAP9Q99996 3911 aa16.39■□□□□ 0.22
HOXA9-202ENST00000396345 PRRC2AP48634 2157 aaKnown RBP16.39■□□□□ 0.21
HOXA9-202ENST00000396345 ACOD1A6NK06 481 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 SULT1C4O75897 302 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 F12P00748 615 aaPredicted RBP16.39■□□□□ 0.21
HOXA9-202ENST00000396345 ZNF81P51508 661 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 MMP15P51511 669 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 EFNA4P52798 201 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 TIGD6Q17RP2 521 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 ZNF684Q5T5D7 378 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 OR5AS1Q8N127 324 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 OR52I1Q8NGK6 324 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 SGK3Q96BR1 496 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 REPIN1Q9BWE0 567 aaKnown RBP16.39■□□□□ 0.21
HOXA9-202ENST00000396345 OPA3Q9H6K4 179 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 FAM206AQ9NX38 181 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 ZNF319Q9P2F9 582 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 MYRFQ9Y2G1 1151 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 OTOGQ6ZRI0 2925 aa16.39■□□□□ 0.21
HOXA9-202ENST00000396345 IRGMA1A4Y4 181 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 C17orf100A8MU93 164 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 RPP14O95059 124 aaKnown RBP16.38■□□□□ 0.21
HOXA9-202ENST00000396345 IGHA1P01876 353 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 MMP16P51512 607 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 PRSS12P56730 875 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 GFOD2Q3B7J2 385 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 ZMAT1Q5H9K5 638 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 Q5PR19 223 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 SHEQ5VZ18 495 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 LAIR2Q6ISS4 152 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 FAM220AQ7Z4H9 259 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 OR8B12Q8NGG6 310 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 NEU4Q8WWR8 484 aaPredicted RBP16.38■□□□□ 0.21
HOXA9-202ENST00000396345 SPSB4Q96A44 273 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 MRPL48Q96GC5 212 aaKnown RBP16.38■□□□□ 0.21
HOXA9-202ENST00000396345 REEP6Q96HR9 211 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 MYCBPQ99417 103 aaPredicted RBP16.38■□□□□ 0.21
HOXA9-202ENST00000396345 MSL2Q9HCI7 577 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 FGF20Q9NP95 211 aaPredicted RBP16.38■□□□□ 0.21
HOXA9-202ENST00000396345 INPP5EQ9NRR6 644 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 GNG8Q9UK08 70 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 R4GMQ9 66 aa16.38■□□□□ 0.21
HOXA9-202ENST00000396345 GGT3PA6NGU5 568 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 ZSCAN5BA6NJL1 495 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 IQCF6A8MYZ5 107 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 SPRY3O43610 288 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 SSX4O60224 188 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 SRSF10O75494 262 aaKnown RBP16.37■□□□□ 0.21
HOXA9-202ENST00000396345 MYF6P23409 242 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 CFL1P23528 166 aaKnown RBP16.37■□□□□ 0.21
HOXA9-202ENST00000396345 MFGE8Q08431 387 aaPredicted RBP16.37■□□□□ 0.21
HOXA9-202ENST00000396345 GALEQ14376 348 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 TESK1Q15569 626 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 PCGF3Q3KNV8 242 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 CDONQ4KMG0 1287 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 TP53I3Q53FA7 332 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 LIPNQ5VXI9 398 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 PRSS57Q6UWY2 283 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 KCTD20Q7Z5Y7 419 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 LHFPL3Q86UP9 236 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 OR8G5Q8NG78 346 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 SPRYD4Q8WW59 207 aaPredicted RBP16.37■□□□□ 0.21
HOXA9-202ENST00000396345 ALG8Q9BVK2 526 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 ANKRD60Q9BZ19 345 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 PBOV1Q9GZY1 135 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 RGCCQ9H4X1 137 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 RAB26Q9ULW5 256 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 GTF2A1LQ9UNN4 478 aa16.37■□□□□ 0.21
HOXA9-202ENST00000396345 CD300LBA8K4G0 201 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 LOC110117498-PIK3R3F6TDL0 507 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 FAM20BO75063 409 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 LY6HO94772 140 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 PNPP00491 289 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 TACSTD2P09758 323 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 DCKP27707 260 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 ACTA2P62736 377 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 ACTG2P63267 376 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms