RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 OR8H3Q8N146 312 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 GVQW1Q8N7I0 195 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 OR2AK2Q8NG84 335 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 OR9K2Q8NGE7 335 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 NUDCD2Q8WVJ2 157 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 SLC39A7Q92504 469 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 ZNF775Q96BV0 537 aaPredicted RBP16.53■□□□□ 0.24
USP49-202ENST00000373010 SLCO5A1Q9H2Y9 848 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 NCKAP5O14513 1909 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 GOSR2O14653 212 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 SIGLEC14Q08ET2 396 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 GRK1Q15835 563 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 NKPD1Q17RQ9 610 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 SLC22A6Q4U2R8 563 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 RAB12Q6IQ22 244 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 TMED4Q7Z7H5 227 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 TRAPPC6BQ86SZ2 158 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 ZNF584Q8IVC4 421 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 LRRC18Q8N456 261 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 BPIFB2Q8N4F0 458 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 TMEM54Q969K7 222 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 RADILQ96JH8 1075 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 SLC6A7Q99884 636 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 SRXN1Q9BYN0 137 aa16.53■□□□□ 0.24
USP49-202ENST00000373010 COL27A1Q8IZC6 1860 aaPredicted RBP16.52■□□□□ 0.24
USP49-202ENST00000373010 OR5H15A6NDH6 313 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 EIF1BO60739 113 aaKnown RBP16.52■□□□□ 0.24
USP49-202ENST00000373010 CD74P04233 296 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 CD63P08962 238 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 ZNF35P13682 527 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 CXCL2P19875 107 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 MSR1P21757 451 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 SCGB2B2Q4G0G5 96 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 DCAF12L2Q5VW00 463 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 ZNF101Q8IZC7 436 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 TNFAIP8L1Q8WVP5 186 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 NICN1Q9BSH3 213 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 B3GNT2Q9NY97 397 aa16.52■□□□□ 0.24
USP49-202ENST00000373010 PLSCR5A0PG75 271 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 TMEM82A0PJX8 343 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 NOS1APO75052 506 aaPredicted RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 CBR3O75828 277 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 CFDP00746 253 aaPredicted RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 GNB3P16520 340 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 GRB2P62993 217 aaKnown RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 EXOSC2Q13868 293 aaKnown RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 ENDOGQ14249 297 aaKnown RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 DCAF12Q5T6F0 453 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 YRDCQ86U90 279 aaKnown RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 CD163Q86VB7 1156 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 RHBDD1Q8TEB9 315 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 PCNPQ8WW12 178 aaKnown RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 ELMOD3Q96FG2 381 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 NAA11Q9BSU3 229 aaPredicted RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 RBM24Q9BX46 236 aaKnown RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 CLEC4MQ9H2X3 399 aaPredicted RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 B4E171 279 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 ERCC1P07992 297 aaPredicted RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 TSPAN7P41732 249 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 GUCA1AP43080 201 aaPredicted RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 OR3A4PP47883 348 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 LSM6P62312 80 aaKnown RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 C10orf128Q5T292 105 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 OR52W1Q6IF63 320 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 GLIPR1L1Q6UWM5 242 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 TMEM123Q8N131 208 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 ZIC4Q8N9L1 334 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 TMEM104Q8NE00 496 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 SELENOIQ9C0D9 397 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 UPB1Q9UBR1 384 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 TCFL5Q9UL49 500 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 PADI1Q9ULC6 663 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 MRPS28Q9Y2Q9 187 aaKnown RBP16.51■□□□□ 0.23
USP49-202ENST00000373010 LOXL2Q9Y4K0 774 aa16.51■□□□□ 0.23
USP49-202ENST00000373010 TMEM14DPA8MWL7 114 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 TCN2P20062 427 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 ACP1P24666 158 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 RAC1P63000 192 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 CSNK2A1P68400 391 aaPredicted RBP16.5■□□□□ 0.23
USP49-202ENST00000373010 DHODHQ02127 395 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 C17orf107Q6ZR85 190 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 TIPARPQ7Z3E1 657 aaKnown RBP16.5■□□□□ 0.23
USP49-202ENST00000373010 CDH26Q8IXH8 852 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 NABP1Q96AH0 204 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 ZNF837Q96EG3 531 aaPredicted RBP16.5■□□□□ 0.23
USP49-202ENST00000373010 LIN37Q96GY3 246 aaPredicted RBP16.5■□□□□ 0.23
USP49-202ENST00000373010 PGAM5Q96HS1 289 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 NELFAQ9H3P2 528 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 OPN4Q9UHM6 478 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 F5H5K5 113 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 GP1BAP07359 652 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 MELTFP08582 738 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 HCKP08631 526 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 OR4E1P0C645 316 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 CCL1P22362 96 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 ATPAF1Q5TC12 328 aaPredicted RBP16.5■□□□□ 0.23
USP49-202ENST00000373010 DOK3Q7L591 496 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 TMEM105Q8N8V8 129 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 OR13C8Q8NGS7 320 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 CT55Q8WUE5 264 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 249.2 ms