RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 OMPP47874 163 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 ERFP50548 548 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 SMIM11AP58511 58 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 ARF6P62330 175 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 NSUN5P1Q3KNT7 163 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 DPY19L2P2Q6ZN68 376 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 DCDC5Q6ZRR9 648 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 CPLX4Q7Z7G2 160 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 ADCK1Q86TW2 530 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 C1orf87Q8N0U7 546 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 NPEPL1Q8NDH3 523 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 COG8Q96MW5 612 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 GPX7Q96SL4 187 aaPredicted RBP13.08□□□□□ -0.32
DDX55-202ENST00000354291 NSRP1Q9H0G5 558 aaKnown RBP13.08□□□□□ -0.32
DDX55-202ENST00000354291 PPA2Q9H2U2 334 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 GORASP2Q9H8Y8 452 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 FBLN5Q9UBX5 448 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 VPREB3Q9UKI3 123 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 UNC119BA6NIH7 251 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 SNX3O60493 162 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 DOK2O60496 412 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 SLC16A7O60669 478 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 CTLA4P16410 223 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 HTR5AP47898 357 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 SRP9P49458 86 aaKnown RBP13.07□□□□□ -0.32
DDX55-202ENST00000354291 RPS6KA3P51812 740 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 LSM6P62312 80 aaKnown RBP13.07□□□□□ -0.32
DDX55-202ENST00000354291 COX10Q12887 443 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 AQP6Q13520 282 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 KRR1Q13601 381 aaKnown RBP13.07□□□□□ -0.32
DDX55-202ENST00000354291 C1orf94Q6P1W5 598 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 C1orf122Q6ZSJ8 110 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 GLB1L2Q8IW92 636 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 PIP4P2Q8N4L2 257 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 OR4S1Q8NGB4 309 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 PTP4A1Q93096 173 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 RASD2Q96D21 266 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 PYURFQ96I23 114 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 RSRC1Q96IZ7 334 aaKnown RBP13.07□□□□□ -0.32
DDX55-202ENST00000354291 FAM107BQ9H098 131 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 SYT4Q9H2B2 425 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 SEMA6AQ9H2E6 1030 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 MMADHCQ9H3L0 296 aaPredicted RBP13.07□□□□□ -0.32
DDX55-202ENST00000354291 RERGLQ9H628 205 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 VSX1Q9NZR4 365 aaPredicted RBP13.07□□□□□ -0.32
DDX55-202ENST00000354291 ERVK-18Q9QC07 812 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 IER3IP1Q9Y5U9 82 aa13.07□□□□□ -0.32
DDX55-202ENST00000354291 TRBV4-1A0A0J9YWV2 114 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 K7EIL1 84 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 TXNDC12O95881 172 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 IRF2P14316 349 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 PMELP40967 661 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 SMARCD3Q6STE5 483 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 RNF148Q8N7C7 305 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 PNLDC1Q8NA58 520 aaKnown RBP13.06□□□□□ -0.32
DDX55-202ENST00000354291 OR13G1Q8NGZ3 307 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 OR52J3Q8NH60 311 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 DHRS1Q96LJ7 313 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 MAGEL2Q9UJ55 1249 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 TMCC3Q9ULS5 477 aa13.06□□□□□ -0.32
DDX55-202ENST00000354291 COA3Q9Y2R0 106 aaPredicted RBP13.06□□□□□ -0.32
DDX55-202ENST00000354291 F5H5P2 479 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 J3QW42 95 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 SOCS2O14508 198 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 DIRAS1O95057 198 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 GADD45GO95257 159 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 FBP1P09467 338 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 HSD17B1P14061 328 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 CRABP1P29762 137 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 NPY4RP50391 375 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 SEC23BQ15437 767 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 KCNMB1Q16558 191 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 OR2T2Q6IF00 324 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 DNM1P34Q6PK57 102 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 KLHDC1Q8N7A1 406 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 FAM86B1Q8N7N1 296 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 CFHR4Q92496 578 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 MCUR1Q96AQ8 359 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 FUZQ9BT04 418 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 NUAK2Q9H093 628 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 SIRPDQ9H106 197 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 ATPIF1Q9UII2 106 aa13.05□□□□□ -0.32
DDX55-202ENST00000354291 IMPA2O14732 288 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 FSTL3O95633 263 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 PSMB10P40306 273 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 CDKN2AP42771 156 aaKnown RBP13.04□□□□□ -0.32
DDX55-202ENST00000354291 RGS6P49758 472 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 FXYD6P3P58550 94 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 ZNF181Q2M3W8 571 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 SAMD4BQ5PRF9 694 aaKnown RBP13.04□□□□□ -0.32
DDX55-202ENST00000354291 PGM2L1Q6PCE3 622 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 PTCHD4Q6ZW05 846 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 PGAM4Q8N0Y7 254 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 GJC3Q8NFK1 279 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 OR5L1Q8NGL2 311 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 OR1F12Q8NHA8 337 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 R3HDM4Q96D70 268 aa13.04□□□□□ -0.32
DDX55-202ENST00000354291 ZNF582Q96NG8 517 aaPredicted RBP13.04□□□□□ -0.32
DDX55-202ENST00000354291 ERMAPQ96PL5 475 aaPredicted RBP13.04□□□□□ -0.32
DDX55-202ENST00000354291 MMP28Q9H239 520 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 773.1 ms