RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 HES3Q5TGS1 186 aa14.71□□□□□ -0.05
SAMM50-201ENST00000350028 ABLIM2Q6H8Q1 611 aa14.71□□□□□ -0.05
SAMM50-201ENST00000350028 OR4C16Q8NGL9 310 aa14.71□□□□□ -0.05
SAMM50-201ENST00000350028 ADAMTS17Q8TE56 1095 aa14.71□□□□□ -0.05
SAMM50-201ENST00000350028 FAM46BQ96A09 425 aa14.71□□□□□ -0.05
SAMM50-201ENST00000350028 SEH1LQ96EE3 360 aa14.71□□□□□ -0.05
SAMM50-201ENST00000350028 B3GNT4Q9C0J1 378 aa14.71□□□□□ -0.05
SAMM50-201ENST00000350028 PTTG3PQ9NZH4 202 aa14.71□□□□□ -0.05
SAMM50-201ENST00000350028 BOLA1Q9Y3E2 137 aa14.71□□□□□ -0.05
SAMM50-201ENST00000350028 NCKAP5O14513 1909 aa14.71□□□□□ -0.06
SAMM50-201ENST00000350028 SSNA1O43805 119 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 SCGNO76038 276 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 IGLV3-1P01715 115 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 STARP49675 285 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 VEGFCP49767 419 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 GFRA1P56159 465 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 GALK2Q01415 458 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 CCDC92Q53HC0 331 aaPredicted RBP14.7□□□□□ -0.06
SAMM50-201ENST00000350028 SPINK14Q6IE38 97 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF782Q6ZMW2 699 aaPredicted RBP14.7□□□□□ -0.06
SAMM50-201ENST00000350028 PIAS4Q8N2W9 510 aaPredicted RBP14.7□□□□□ -0.06
SAMM50-201ENST00000350028 TMEM229BQ8NBD8 167 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 CLEC1AQ8NC01 280 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 CCDC54Q8NEL0 328 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 BEST4Q8NFU0 473 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 OR2M7Q8NG81 312 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 OR10D3Q8NH80 312 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 FAM71F1Q96KD3 344 aaPredicted RBP14.7□□□□□ -0.06
SAMM50-201ENST00000350028 RANBP3Q9H6Z4 567 aaPredicted RBP14.7□□□□□ -0.06
SAMM50-201ENST00000350028 GPN1Q9HCN4 374 aaPredicted RBP14.7□□□□□ -0.06
SAMM50-201ENST00000350028 PLSCR3Q9NRY6 295 aa14.7□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF107Q9UII5 783 aaPredicted RBP14.7□□□□□ -0.06
SAMM50-201ENST00000350028 MEIKINA0A087WXM9 373 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 OR5H15A6NDH6 313 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 FABP7O15540 132 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 TNFSF15O95150 251 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 HPXP02790 462 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 ABOP16442 354 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF93P35789 620 aaPredicted RBP14.69□□□□□ -0.06
SAMM50-201ENST00000350028 TAS2R19P59542 299 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 QRFPP83859 136 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 RBMS2Q15434 407 aaKnown RBP14.69□□□□□ -0.06
SAMM50-201ENST00000350028 DCAF10Q5QP82 559 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 OR10K2Q6IF99 312 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 FAAP20Q6NZ36 180 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 GLDNQ6ZMI3 551 aaPredicted RBP14.69□□□□□ -0.06
SAMM50-201ENST00000350028 AAED1Q7RTV5 226 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 OR5AS1Q8N127 324 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 OR14K1Q8NGZ2 314 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 CPT1CQ8TCG5 803 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 CPNE4Q96A23 557 aaPredicted RBP14.69□□□□□ -0.06
SAMM50-201ENST00000350028 BEX1Q9HBH7 125 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 PARD6AQ9NPB6 346 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 ZFHX2Q9C0A1 2572 aaPredicted RBP14.69□□□□□ -0.06
SAMM50-201ENST00000350028 A0A0U1RQV5 110 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 NEURL1O76050 574 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 OTX1P32242 354 aaPredicted RBP14.69□□□□□ -0.06
SAMM50-201ENST00000350028 GSK3AP49840 483 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 AIMP2Q13155 320 aaKnown RBP14.69□□□□□ -0.06
SAMM50-201ENST00000350028 STEAP1BQ6NZ63 245 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 OR2W3Q7Z3T1 314 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 LRRC18Q8N456 261 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 PAQR4Q8N4S7 273 aaPredicted RBP14.69□□□□□ -0.06
SAMM50-201ENST00000350028 ROBO4Q8WZ75 1007 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 SPTSSAQ969W0 71 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 NUDT16L1Q9BRJ7 211 aaKnown RBP14.69□□□□□ -0.06
SAMM50-201ENST00000350028 GON7Q9BXV9 100 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 MYEF2Q9P2K5 600 aaKnown RBP14.69□□□□□ -0.06
SAMM50-201ENST00000350028 B4GALT7Q9UBV7 327 aa14.69□□□□□ -0.06
SAMM50-201ENST00000350028 DOCK10Q96BY6 2186 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 SNRPGP15A8MWD9 76 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 STMND1H3BQB6 276 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 SMLR1H3BR10 107 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 CYTIPO60759 359 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 F10P00742 488 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 CST2P09228 141 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 GSTT2P0CG29 244 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 VSIG8P0DPA2 414 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 CXCL3P19876 107 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 ITGA3P26006 1051 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 RCVRNP35243 200 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 RAD52P43351 418 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 SPEM2Q0P670 501 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 Q6ZSR3 168 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 ANGPTL5Q86XS5 388 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 GABRG1Q8N1C3 465 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 GPR137CQ8N3F9 429 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 ITFG2Q969R8 447 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF775Q96BV0 537 aaPredicted RBP14.68□□□□□ -0.06
SAMM50-201ENST00000350028 GAL3ST1Q99999 423 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 SOX7Q9BT81 388 aa14.68□□□□□ -0.06
SAMM50-201ENST00000350028 MEIS3P1A6NDR6 274 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 TMEM14DPA8MWL7 114 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 F5H5K5 113 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 RAB27BO00194 218 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 CD3DP04234 171 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 HPNP05981 417 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 THBS4P35443 961 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 NBL1P41271 181 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 CLDN15P56746 228 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms