RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 HIVEP2P31629 2446 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 ZANQ9Y493 2812 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 TANC2Q9HCD6 1990 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 CCDC182A6NF36 153 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 PHYHO14832 338 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 RP2O75695 350 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 TACSTD2P09758 323 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 SLC2A1P11166 492 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 CFL1P23528 166 aaKnown RBP16.3■□□□□ 0.2
SYNE4-202ENST00000340477 SRP9P49458 86 aaKnown RBP16.3■□□□□ 0.2
SYNE4-202ENST00000340477 POU4F2Q12837 409 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 GLYATL3Q5SZD4 288 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 ZBTB49Q6ZSB9 765 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 OR2AE1Q8NHA4 323 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 CCL17Q92583 94 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 HPS1Q92902 700 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 RAB1CQ92928 201 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 PGAM5Q96HS1 289 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 MROQ9BYG7 248 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 SLC22A4Q9H015 551 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 WARS2Q9UGM6 360 aaKnown RBP16.3■□□□□ 0.2
SYNE4-202ENST00000340477 IL19Q9UHD0 177 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 CSPG4Q6UVK1 2322 aa16.3■□□□□ 0.2
SYNE4-202ENST00000340477 ALOX5APP20292 161 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 POLR2IP36954 125 aaKnown RBP16.29■□□□□ 0.2
SYNE4-202ENST00000340477 ZNF121P58317 390 aaPredicted RBP16.29■□□□□ 0.2
SYNE4-202ENST00000340477 ZNF92Q03936 586 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 AADACL4Q5VUY2 407 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 LRRN1Q6UXK5 716 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 Q6ZR03 302 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 FAM57BQ71RH2 274 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 OR10AD1Q8NGE0 317 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 OR2V2Q96R30 315 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 AMELYQ99218 206 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 SLC30A2Q9BRI3 323 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 BRD7Q9NPI1 651 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 YAE1D1Q9NRH1 226 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 NSD1Q96L73 2696 aaPredicted RBP16.29■□□□□ 0.2
SYNE4-202ENST00000340477 ABCA1O95477 2261 aa16.29■□□□□ 0.2
SYNE4-202ENST00000340477 ZNF670-ZNF695F2Z2N8 137 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 IFNL4K9M1U5 179 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 ATP6V1E1P36543 226 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 PSMA6P60900 246 aaKnown RBP16.28■□□□□ 0.2
SYNE4-202ENST00000340477 SNCBQ16143 134 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 GFOD2Q3B7J2 385 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 ZIK1Q3SY52 487 aaPredicted RBP16.28■□□□□ 0.2
SYNE4-202ENST00000340477 DEGS2Q6QHC5 323 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 BCDIN3DQ7Z5W3 292 aaKnown RBP16.28■□□□□ 0.2
SYNE4-202ENST00000340477 TRUB1Q8WWH5 349 aaKnown RBP16.28■□□□□ 0.2
SYNE4-202ENST00000340477 REEP6Q96HR9 211 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 RGCCQ9H4X1 137 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 IKZF2Q9UKS7 526 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 PPP1R3CQ9UQK1 317 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 KLHDC2Q9Y2U9 406 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 LRP12Q9Y561 859 aa16.28■□□□□ 0.2
SYNE4-202ENST00000340477 LRP5LA4QPB2 252 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 SNTNA6NMZ2 147 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 CD300LBA8K4G0 201 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 LILRA1O75019 489 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 IGHV4-31P0DP07 118 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 ZNF16P17020 682 aaPredicted RBP16.27■□□□□ 0.2
SYNE4-202ENST00000340477 HTR1FP30939 366 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 DDOSTP39656 456 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 EFNB1P98172 346 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 KRTAP1-1Q07627 177 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 TMED1Q13445 227 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 TRIP10Q15642 601 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 ZNF829Q3KNS6 432 aaPredicted RBP16.27■□□□□ 0.2
SYNE4-202ENST00000340477 SLC35F2Q8IXU6 374 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 FTMTQ8N4E7 242 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 OR51G2Q8NGK0 314 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 ITLN1Q8WWA0 313 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 HRASLS5Q96KN8 279 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 REPIN1Q9BWE0 567 aaKnown RBP16.27■□□□□ 0.2
SYNE4-202ENST00000340477 NARFLQ9H6Q4 476 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 HAO2Q9NYQ3 351 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 MRPL15Q9P015 296 aaKnown RBP16.27■□□□□ 0.2
SYNE4-202ENST00000340477 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.27■□□□□ 0.2
SYNE4-202ENST00000340477 GMPPBQ9Y5P6 360 aa16.27■□□□□ 0.2
SYNE4-202ENST00000340477 C2CD3Q4AC94 2353 aa16.27■□□□□ 0.19
SYNE4-202ENST00000340477 SETD2Q9BYW2 2564 aaPredicted RBP16.27■□□□□ 0.19
SYNE4-202ENST00000340477 YLPM1P49750 1951 aaKnown RBP16.26■□□□□ 0.19
SYNE4-202ENST00000340477 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.26■□□□□ 0.19
SYNE4-202ENST00000340477 ISPDA4D126 451 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 A8MV72 311 aaPredicted RBP16.26■□□□□ 0.19
SYNE4-202ENST00000340477 ZNF254O75437 659 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 RIDAP52758 137 aaKnown RBP16.26■□□□□ 0.19
SYNE4-202ENST00000340477 PRSS12P56730 875 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 MVKQ03426 396 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 MZT1Q08AG7 82 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 OR8G1Q15617 311 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 C6orf52Q5T4I8 152 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 ADAT1Q9BUB4 502 aaKnown RBP16.26■□□□□ 0.19
SYNE4-202ENST00000340477 ADGRL4Q9HBW9 690 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 CLN6Q9NWW5 311 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 TREM2Q9NZC2 230 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 ZNF391Q9UJN7 358 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 CACNG2Q9Y698 323 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 DYSFO75923 2080 aa16.26■□□□□ 0.19
SYNE4-202ENST00000340477 LOC100289279A0A1B0GTE1 492 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms