RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ATG2BQ96BY7 2078 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 TLCD2A6NGC4 264 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 RAC2P15153 192 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 METAP1P53582 386 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 LHX8Q68G74 356 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 CD300LGQ6UXG3 332 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 ZNF683Q8IZ20 524 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 GPR61Q9BZJ8 451 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 KCNG2Q9UJ96 466 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 BCAT2O15382 392 aaPredicted RBP14.54□□□□□ -0.08
NPHP3-201ENST00000337331 FCGR2AP12318 317 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 GALP22466 123 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 CD1CP29017 333 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 ZNF93P35789 620 aaPredicted RBP14.54□□□□□ -0.08
NPHP3-201ENST00000337331 NAT6Q93015 286 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 PACRGQ96M98 296 aaPredicted RBP14.54□□□□□ -0.08
NPHP3-201ENST00000337331 MCM3APO60318 1980 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 NTN1O95631 604 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 CALCBP10092 127 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 ST6GAL1P15907 406 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 PI3P19957 117 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 HABP2Q14520 560 aaPredicted RBP14.54□□□□□ -0.08
NPHP3-201ENST00000337331 SSX7Q7RTT5 188 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 GPA33Q99795 319 aa14.54□□□□□ -0.08
NPHP3-201ENST00000337331 ALX4Q9H161 411 aaPredicted RBP14.54□□□□□ -0.08
NPHP3-201ENST00000337331 CACNA1IQ9P0X4 2223 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 GSTZ1O43708 216 aaPredicted RBP14.53□□□□□ -0.08
NPHP3-201ENST00000337331 HNF1AP20823 631 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 GDF1P27539 372 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 RPS18P62269 152 aaKnown RBP14.53□□□□□ -0.08
NPHP3-201ENST00000337331 MFAP5Q13361 173 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 CLEC12BQ2HXU8 276 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 MIDNQ504T8 468 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 C1orf140Q5VVS0 124 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 LYSMD4Q5XG99 296 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 PLCXD3Q63HM9 321 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 CD200R1LQ6Q8B3 271 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 SLC43A2Q8N370 569 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 OBP2AQ9NY56 170 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 LOC100289279A0A1B0GTE1 492 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 LOC102725191A0A1B0GVB3 256 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 PRAMEF25A6NGN4 478 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 GREM1O60565 184 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 HAGHQ16775 308 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 DCXRQ7Z4W1 244 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 SLC22A24Q8N4F4 322 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 OR4D6Q8NGJ1 314 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 RHBDD1Q8TEB9 315 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 TBX21Q9UL17 535 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 COA3Q9Y2R0 106 aaPredicted RBP14.53□□□□□ -0.08
NPHP3-201ENST00000337331 MMACHCQ9Y4U1 282 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 OR2A4O95047 310 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 PNPP00491 289 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 TBXA2RP21731 343 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 TAS2R46P59540 309 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 TOMM34Q15785 309 aaPredicted RBP14.53□□□□□ -0.08
NPHP3-201ENST00000337331 OR2A7Q96R45 310 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 MTFP1Q9UDX5 166 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 PISDQ9UG56 409 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 OR52A1Q9UKL2 312 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 OR51B4Q9Y5P0 310 aa14.53□□□□□ -0.08
NPHP3-201ENST00000337331 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.52□□□□□ -0.08
NPHP3-201ENST00000337331 EN2P19622 333 aaPredicted RBP14.52□□□□□ -0.08
NPHP3-201ENST00000337331 HTR5AP47898 357 aa14.52□□□□□ -0.08
NPHP3-201ENST00000337331 DIO1P49895 249 aa14.52□□□□□ -0.08
NPHP3-201ENST00000337331 ZNF574Q6ZN55 896 aaPredicted RBP14.52□□□□□ -0.08
NPHP3-201ENST00000337331 LRP11Q86VZ4 500 aa14.52□□□□□ -0.08
NPHP3-201ENST00000337331 NUDCD2Q8WVJ2 157 aa14.52□□□□□ -0.08
NPHP3-201ENST00000337331 SOSTQ9BQB4 213 aa14.52□□□□□ -0.08
NPHP3-201ENST00000337331 EMC6Q9BV81 110 aa14.52□□□□□ -0.08
NPHP3-201ENST00000337331 OR5V1Q9UGF6 321 aa14.52□□□□□ -0.08
NPHP3-201ENST00000337331 MCTS1Q9ULC4 181 aaKnown RBP14.52□□□□□ -0.08
NPHP3-201ENST00000337331 OR2W5A6NFC9 320 aa14.52□□□□□ -0.08
NPHP3-201ENST00000337331 ACSM1Q08AH1 577 aa14.52□□□□□ -0.08
NPHP3-201ENST00000337331 SMAD4Q13485 552 aaKnown RBP14.52□□□□□ -0.08
NPHP3-201ENST00000337331 IAH1Q2TAA2 248 aaPredicted RBP14.52□□□□□ -0.08
NPHP3-201ENST00000337331 RPUSD3Q6P087 351 aaKnown RBP14.52□□□□□ -0.08
NPHP3-201ENST00000337331 OR4D11Q8NGI4 311 aa14.52□□□□□ -0.08
NPHP3-201ENST00000337331 NANOS1Q8WY41 292 aaKnown RBP14.52□□□□□ -0.08
NPHP3-201ENST00000337331 SLCO5A1Q9H2Y9 848 aa14.52□□□□□ -0.08
NPHP3-201ENST00000337331 IGHV3-20A0A0C4DH32 117 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 CD300LBA8K4G0 201 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 ACTL6AO96019 429 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 TK1P04183 234 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 GNG10P50151 68 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 NPY4RP50391 375 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 MLC1Q15049 377 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 STAC2Q6ZMT1 411 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 SLC16A14Q7RTX9 510 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 TSEN54Q7Z6J9 526 aaKnown RBP14.52□□□□□ -0.09
NPHP3-201ENST00000337331 FAM219AQ8IW50 185 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 C1orf87Q8N0U7 546 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 ZNF845Q96IR2 970 aaPredicted RBP14.52□□□□□ -0.09
NPHP3-201ENST00000337331 DUSP23Q9BVJ7 150 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 SVILO95425 2214 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 A6NCN8 305 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 CXCL10P02778 98 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 CAMKMTQ7Z624 323 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 ANGPTL5Q86XS5 388 aa14.52□□□□□ -0.09
NPHP3-201ENST00000337331 ARIH2OSQ8N7S6 290 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms