RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 EXOSC8Q96B26 276 aaKnown RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 DGCR14Q96DF8 476 aaKnown RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 NEURL3Q96EH8 262 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 AKR1E2Q96JD6 320 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 DUX3Q96PT4 197 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 NRTNQ99748 197 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ZNF717Q9BY31 904 aaPredicted RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 BARHL1Q9BZE3 327 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ING2Q9H160 280 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 MLXQ9UH92 298 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 RARRES3Q9UL19 164 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 CLEC4AQ9UMR7 237 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ZNF780BQ9Y6R6 833 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 SPACA6W5XKT8 324 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 PRRC2BQ5JSZ5 2229 aaKnown RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 A0A0G2JN53 185 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 LOC100130705A0A1B0GUX0 176 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 OR6C74A6NCV1 312 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 hCG_2039718K7EN88 272 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 DLGAP1O14490 977 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 PPIHO43447 177 aaKnown RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 BCAS1O75363 584 aaPredicted RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 IGKV3-20P01619 116 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 SEMG1P04279 462 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 TFPTP0C1Z6 253 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 CSNK2A2P19784 350 aaPredicted RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 NT5EP21589 574 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 AQP1P29972 269 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 PEBP1P30086 187 aaKnown RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 PPP2R1BP30154 601 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 OTX2P32243 289 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 RPL4P36578 427 aaKnown RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 NCBP2P52298 156 aaKnown RBP eCLIP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 RAB8AP61006 207 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 BTN3A2P78410 334 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 C16orf72Q14CZ0 275 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 ELOCQ15369 112 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 TMEM44Q2T9K0 475 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 KCTD21Q4G0X4 260 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 TMEM31Q5JXX7 168 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 RBM48Q5RL73 367 aaKnown RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 TPRG1LQ5T0D9 272 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 SAXO2Q658L1 398 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 ABHD13Q7L211 337 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 ZNF679Q8IYX0 411 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 OR8J1Q8NGP2 316 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 OR10G6Q8NH81 332 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 OR5AK3PQ8NH89 298 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 NT5CQ8TCD5 201 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 GTF3AQ92664 365 aaKnown RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 TM4SF19Q96DZ7 209 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 TSC22D3Q99576 134 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 GABARAPL1Q9H0R8 117 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 PRO3102Q9H379 93 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 ELL3Q9HB65 397 aaPredicted RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 VCX3AQ9NNX9 186 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 LHX9Q9NQ69 397 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 HRASLS2Q9NWW9 162 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 MS4A12Q9NXJ0 267 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 PDP1Q9P0J1 537 aaPredicted RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 ENOPH1Q9UHY7 261 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 PHF11Q9UIL8 331 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 SPATA2Q9UM82 520 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 CHTOPQ9Y3Y2 248 aaKnown RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 SAMHD1Q9Y3Z3 626 aaKnown RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 ASB4Q9Y574 426 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 HSPE1-MOB4S4R3N1 261 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 TRAV6A0A075B6T7 132 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 IGHV3-16A0A0C4DH30 117 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 CCDC160A6NGH7 325 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 C10orf142B7Z368 130 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 TNFRSF11BO00300 401 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 EMC8O43402 210 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 GCM2O75603 506 aaPredicted RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 C1QCP02747 245 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 IFNW1P05000 195 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 IGF1P05019 195 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 GNAO1P09471 354 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 ANXA8P13928 327 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 UGT2B7P16662 529 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 MAGP20916 626 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 CPN2P22792 545 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 IGFBP5P24593 272 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 RRM2P31350 389 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 NOVA1P51513 510 aaKnown RBP3.22□□□□□ -1.89
SMCO3-201ENST00000316048 IST1P53990 364 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 SKP1P63208 163 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 VLDLRP98155 873 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 FZD2Q14332 565 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 LINC00242Q5T6M2 205 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 AADACL4Q5VUY2 407 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 SLC48A1Q6P1K1 146 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 KCNIP4Q6PIL6 250 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 Q6ZS52 159 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 VTCN1Q7Z7D3 282 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 GALNT10Q86SR1 603 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 CYP4Z1Q86W10 505 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 GKN2Q86XP6 184 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 SLC38A6Q8IZM9 456 aa3.22□□□□□ -1.89
SMCO3-201ENST00000316048 OR4K14Q8NGD5 310 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms