RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 PPIL1Q9Y3C6 166 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 TUBAL3A6NHL2 446 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 TPPP2P59282 170 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 FRMPD2BQ6IN97 320 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 DPY19L2P2Q6ZN68 376 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 C20orf196Q8IYI0 205 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 CLMPQ9H6B4 373 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 NRAPQ86VF7 1730 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 GDNFP39905 211 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 BPIFB3P59826 476 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 LCN15Q6UWW0 184 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 SPRED1Q7Z699 444 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 LRRC28Q86X40 367 aaPredicted RBP9.04□□□□□ -0.96
TRIM44-201ENST00000299413 PGBD5Q8N414 524 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 LILRB1Q8NHL6 650 aaPredicted RBP9.04□□□□□ -0.96
TRIM44-201ENST00000299413 CSF3RQ99062 836 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 TIMM10BQ9Y5J6 103 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 SONP18583 2426 aaKnown RBP9.04□□□□□ -0.96
TRIM44-201ENST00000299413 CBR3O75828 277 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 APOBEC1P41238 236 aaKnown RBP9.04□□□□□ -0.96
TRIM44-201ENST00000299413 ELAVL1Q15717 326 aaKnown RBP9.04□□□□□ -0.96
TRIM44-201ENST00000299413 SLC35D1Q9NTN3 355 aa9.04□□□□□ -0.96
TRIM44-201ENST00000299413 B4GALT3O60512 393 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 SLC2A10O95528 541 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 ASH2LQ9UBL3 628 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 EPHA2P29317 976 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 ZNF133P52736 654 aaPredicted RBP9.03□□□□□ -0.96
TRIM44-201ENST00000299413 PCBP4P57723 403 aaKnown RBP9.03□□□□□ -0.96
TRIM44-201ENST00000299413 ACTBL2Q562R1 376 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 GRINAQ7Z429 371 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 OR4Q3Q8NH05 313 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 MSL2Q9HCI7 577 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 PROX2Q3B8N5 592 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 NOXA1Q86UR1 476 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 UBTD2Q8WUN7 234 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 ERGIC1Q969X5 290 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 PLEKHF2Q9H8W4 249 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 SDHBP21912 280 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 GPX3P22352 226 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 LRRTM1Q86UE6 522 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 TMEM181Q9P2C4 612 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 GATCO43716 136 aaKnown RBP9.03□□□□□ -0.96
TRIM44-201ENST00000299413 BTN1A1Q13410 526 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 RBMS2Q15434 407 aaKnown RBP9.03□□□□□ -0.96
TRIM44-201ENST00000299413 C15orf39Q6ZRI6 1047 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 HIST2H3AQ71DI3 136 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 GNRHR2Q96P88 292 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 AAMDCQ9H7C9 122 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 ELK1P19419 428 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 ADGRE4PQ86SQ3 457 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 LIPGQ9Y5X9 500 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 MBLAC1A4D2B0 266 aaPredicted RBP9.03□□□□□ -0.96
TRIM44-201ENST00000299413 GPANK1O95872 356 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 SRMP19623 302 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 CAPZBP47756 277 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 CSNK1G2P78368 415 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 RAB40BQ12829 278 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 HSD17B13Q7Z5P4 300 aaPredicted RBP9.03□□□□□ -0.96
TRIM44-201ENST00000299413 SLAMF6Q96DU3 332 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 OR52A5Q9H2C5 316 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 GPR55Q9Y2T6 319 aaPredicted RBP9.03□□□□□ -0.96
TRIM44-201ENST00000299413 LOC102723971A0A1B0GUV8 181 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 SPINK4O60575 86 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 OPRK1P41145 380 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 RAB5CP51148 216 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 LSMEM2Q8N112 164 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 FBXO8Q9NRD0 319 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 SDR39U1Q9NRG7 319 aaPredicted RBP9.03□□□□□ -0.96
TRIM44-201ENST00000299413 ACOXLQ9NUZ1 547 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 RAB22AQ9UL26 194 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 MAST2Q6P0Q8 1798 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 RPL27P61353 136 aaKnown RBP9.03□□□□□ -0.96
TRIM44-201ENST00000299413 TATDN3Q17R31 274 aa9.03□□□□□ -0.96
TRIM44-201ENST00000299413 FITM1A5D6W6 292 aa9.02□□□□□ -0.96
TRIM44-201ENST00000299413 M0R135 149 aa9.02□□□□□ -0.96
TRIM44-201ENST00000299413 LYZP61626 148 aa9.02□□□□□ -0.96
TRIM44-201ENST00000299413 TMEM267Q0VDI3 215 aaPredicted RBP9.02□□□□□ -0.96
TRIM44-201ENST00000299413 ZNF77Q15935 545 aa9.02□□□□□ -0.96
TRIM44-201ENST00000299413 ZNF799Q96GE5 643 aa9.02□□□□□ -0.96
TRIM44-201ENST00000299413 SULT1C2O00338 296 aa9.02□□□□□ -0.96
TRIM44-201ENST00000299413 OR10K2Q6IF99 312 aa9.02□□□□□ -0.96
TRIM44-201ENST00000299413 SLC25A26Q70HW3 274 aa9.02□□□□□ -0.96
TRIM44-201ENST00000299413 LMO3Q8TAP4 145 aa9.02□□□□□ -0.96
TRIM44-201ENST00000299413 ACSS1Q9NUB1 689 aaPredicted RBP9.02□□□□□ -0.96
TRIM44-201ENST00000299413 C4AP0C0L4 1744 aa9.02□□□□□ -0.96
TRIM44-201ENST00000299413 HSD17B1P14061 328 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 FCGR2CP31995 323 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 TFPI2P48307 235 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 C4orf17Q53FE4 359 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 LHFPL2Q6ZUX7 228 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 LRP10Q7Z4F1 713 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 WBP2Q969T9 261 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 MS4A8Q9BY19 250 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 TMPRSS13Q9BYE2 586 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 NDRG4Q9ULP0 352 aaKnown RBP9.02□□□□□ -0.97
TRIM44-201ENST00000299413 TET1Q8NFU7 2136 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 SNAPINO95295 136 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 MT-CO3P00414 261 aa9.02□□□□□ -0.97
TRIM44-201ENST00000299413 ZNF121P58317 390 aaPredicted RBP9.02□□□□□ -0.97
TRIM44-201ENST00000299413 SPINK14Q6IE38 97 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms