RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 AMBPP02760 352 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 KLK2P20151 261 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 IGFALSP35858 605 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 GLO1Q04760 184 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 RAB32Q13637 225 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 AWAT2Q6E213 333 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 TEX38Q6PEX7 206 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 LINC01555Q8NAE3 123 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 TMEM239Q8WW34 195 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 OR2M4Q96R27 311 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 OR7D2Q96RA2 312 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 TPSD1Q9BZJ3 242 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 ZNF432O94892 652 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 CSTBP04080 98 aaKnown RBP14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 PGA4P0DJD7 388 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 PGA5P0DJD9 388 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 ZNF136P52737 540 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 EGR3Q06889 387 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 GAGE1Q13065 139 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 MAJINQ3KP22 176 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 METRNLQ641Q3 311 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 LEG1Q6P5S2 330 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 BTNL3Q6UXE8 466 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 GVQW1Q8N7I0 195 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 OR6K6Q8NGW6 343 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 SLC2A12Q8TD20 617 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 RPS4Y2Q8TD47 263 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 TMEM106AQ96A25 262 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 BPIFA2Q96DR5 249 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 TNFRSF13CQ96RJ3 184 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 NMES1Q9C002 83 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 PDE7BQ9NP56 450 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 CALML5Q9NZT1 146 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 FRRS1LQ9P0K9 344 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 A0A1W2PPV9 198 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 C4orf47A7E2U8 309 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 IFNL4K9M1U5 179 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 SRPX2O60687 465 aaPredicted RBP14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 CEBPGP53567 150 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 ADAM8P78325 824 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 MLF2Q15773 248 aaPredicted RBP14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 FAM46CQ5VWP2 391 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 PRSS54Q6PEW0 395 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 APCDD1LQ8NCL9 501 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 RAB39BQ96DA2 213 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 MACROD1Q9BQ69 325 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 SLC35B3Q9H1N7 401 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 NELFAQ9H3P2 528 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 OBP2AQ9NY56 170 aa14.06□□□□□ -0.16
CTDSP1-201ENST00000273062 SCAF4O95104 1147 aaKnown RBP14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 CD1AP06126 327 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 OR9K2Q8NGE7 335 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 FAM3DQ96BQ1 224 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 OR10C1Q96KK4 312 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 HEATR5BQ9P2D3 2071 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 K7EQS6 105 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 TCF21O43680 179 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 RCBTB2O95199 551 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 AK4P27144 223 aaPredicted RBP14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 THBS4P35443 961 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 S100A10P60903 97 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 DLX2Q07687 328 aaPredicted RBP14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 TIPARPQ7Z3E1 657 aaKnown RBP14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 UBE3DQ7Z6J8 389 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 ZNF101Q8IZC7 436 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 CCDC74AQ96AQ1 378 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 FAAP24Q9BTP7 215 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 KLHDC2Q9Y2U9 406 aa14.05□□□□□ -0.16
CTDSP1-201ENST00000273062 VCANP13611 3396 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 MDC1Q14676 2089 aaKnown RBP14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 TMEM269A0A1B0GVZ9 245 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 H0YL77 283 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 STK17BO94768 372 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 DUS4LO95620 317 aaKnown RBP14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 APODP05090 189 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 TAGLN2P37802 199 aaKnown RBP14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 HYAL1Q12794 435 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 HAGHQ16775 308 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 HSD17B11Q8NBQ5 300 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 PLPP7Q8NBV4 271 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 Q9N2J8 555 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 KLHL28Q9NXS3 571 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 PEX12O00623 359 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 GABRA4P48169 554 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 SPEM2Q0P670 501 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 SLC9A3R2Q15599 337 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 EIF5AL1Q6IS14 154 aaKnown RBP14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 MED25Q71SY5 747 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 OR5AK2Q8NH90 309 aa14.04□□□□□ -0.16
CTDSP1-201ENST00000273062 PRSS47A8MTI9 375 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 DVL1O14640 695 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 P2RX6O15547 441 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 CRYABP02511 175 aaKnown RBP14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 ERGP11308 486 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 SELEP16581 610 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 PPP1CCP36873 323 aaKnown RBP14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 KIR2DL1P43626 348 aaPredicted RBP14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 RAB35Q15286 201 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 GXYLT1Q4G148 440 aa14.03□□□□□ -0.16
CTDSP1-201ENST00000273062 SOHLH1Q5JUK2 328 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms