RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 HCCSP53701 268 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 LSM11P83369 360 aaKnown RBP eCLIP10.37□□□□□ -0.75
PTPN4-201ENST00000263708 CCDC190Q86UF4 302 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 WDTC1Q8N5D0 677 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 RHOFQ9HBH0 211 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 KLF13Q9Y2Y9 288 aaPredicted RBP10.37□□□□□ -0.75
PTPN4-201ENST00000263708 SLC22A20A6NK97 555 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 CLDN24A6NM45 220 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 Q3ZCU0 254 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 LRRTM3Q86VH5 581 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 CLDN22Q8N7P3 220 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 OR10V1Q8NGI7 309 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 DYNLRB2Q8TF09 96 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 C7orf43Q8WVR3 580 aa10.37□□□□□ -0.75
PTPN4-201ENST00000263708 CD14P08571 375 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 TPMTP51580 245 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 OR2T2Q6IF00 324 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 LSM2Q9Y333 95 aaKnown RBP10.36□□□□□ -0.75
PTPN4-201ENST00000263708 FZD9O00144 591 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 ANKRD34CP0C6C1 535 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 VEGFBP49765 207 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 PIGPP57054 158 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 RPL27P61353 136 aaKnown RBP10.36□□□□□ -0.75
PTPN4-201ENST00000263708 SLC46A2Q9BY10 475 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 MRPL37Q9BZE1 423 aaKnown RBP10.36□□□□□ -0.75
PTPN4-201ENST00000263708 NPAP1Q9NZP6 1156 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 TRAV34A0A0B4J273 112 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 HTR1DP28221 377 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 CD80P33681 288 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 PPOXP50336 477 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 OR5AP2Q8NGF4 316 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 PLPPR2Q96GM1 343 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 C10orf90Q96M02 699 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 PRSS16Q9NQE7 514 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 TOX3O15405 576 aaPredicted RBP10.36□□□□□ -0.75
PTPN4-201ENST00000263708 TGFBR1P36897 503 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 PPP2CBP62714 309 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 TMEM267Q0VDI3 215 aaPredicted RBP10.36□□□□□ -0.75
PTPN4-201ENST00000263708 FCN2Q15485 313 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 COX20Q5RI15 118 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 TCFL5Q9UL49 500 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 FAM3AP98173 230 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 GPR45Q9Y5Y3 372 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 HOXC13P31276 330 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 PCYT2Q99447 389 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 HSD17B10Q99714 261 aaKnown RBP10.36□□□□□ -0.75
PTPN4-201ENST00000263708 IGKV3-7A0A075B6H7 116 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 UNCXA6NJT0 531 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 HOXD13P35453 343 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 SLC25A32Q9H2D1 315 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 ZNF391Q9UJN7 358 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 SIGLEC1Q9BZZ2 1709 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 TPRP12270 2363 aaKnown RBP10.36□□□□□ -0.75
PTPN4-201ENST00000263708 LOC107986453A0A1B0GWG9 222 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 K7EQS6 105 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 FBXL6Q8N531 539 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 OR4D10Q8NGI6 311 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 OR6S1Q8NH40 331 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 RPEQ96AT9 228 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 PRR14Q9BWN1 585 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 SLC25A22Q9H936 323 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 ASH2LQ9UBL3 628 aa10.36□□□□□ -0.75
PTPN4-201ENST00000263708 M0R135 149 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 HRH1P35367 487 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 TOMM20LQ6UXN7 152 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 RPS19BP1Q86WX3 136 aaKnown RBP10.35□□□□□ -0.75
PTPN4-201ENST00000263708 ZNF799Q96GE5 643 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 AKIRIN1Q9H9L7 192 aaPredicted RBP10.35□□□□□ -0.75
PTPN4-201ENST00000263708 U3KQ87 197 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 TAAR5O14804 337 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 RBFOX1Q9NWB1 397 aaKnown RBP10.35□□□□□ -0.75
PTPN4-201ENST00000263708 SERPINE3A8MV23 424 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 MGPP08493 103 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 UQCRFS1P47985 274 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 DAPP51397 102 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 GUK1Q16774 197 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 VMA21Q3ZAQ7 101 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 SLC35D3Q5M8T2 416 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 ESRP2Q9H6T0 727 aaKnown RBP10.35□□□□□ -0.75
PTPN4-201ENST00000263708 DIDO1Q9BTC0 2240 aaKnown RBP10.35□□□□□ -0.75
PTPN4-201ENST00000263708 M0R082 166 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 SLAMF6Q96DU3 332 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 GNG4P50150 75 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 CELF2-AS1Q8N7Q2 184 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 TMEM116Q8NCL8 245 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 LRRC15Q8TF66 581 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 SARAFQ96BY9 339 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 ESPL1Q14674 2120 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 A0A1W2PNR3 127 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 TRABD2BA6NFA1 517 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 ATP1B1P05026 303 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 BCL6P41182 706 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 TEX261Q6UWH6 196 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 ZNF576Q9H609 170 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 IL17CQ9P0M4 197 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 CDC14BO60729 498 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 SHHQ15465 462 aa10.35□□□□□ -0.75
PTPN4-201ENST00000263708 MRPL43Q8N983 215 aaKnown RBP10.35□□□□□ -0.75
PTPN4-201ENST00000263708 SLC25A43Q8WUT9 341 aaPredicted RBP10.35□□□□□ -0.75
PTPN4-201ENST00000263708 GLIPR2Q9H4G4 154 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms