RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 RGS6P49758 472 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 WNT4P56705 351 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 ARL9Q6T311 187 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 PRSS45Q7RTY3 260 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 SPARTQ8N0X7 666 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 SVOPQ8N4V2 548 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 RNF166Q96A37 237 aaPredicted RBP17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 PIK3IP1Q96FE7 263 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 C4orf45Q96LM5 186 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 LURAP1Q96LR2 239 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 KCNS3Q9BQ31 491 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 C1QTNF5Q9BXJ0 243 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 TBCCD1Q9NVR7 557 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 FAM206AQ9NX38 181 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 LSM2Q9Y333 95 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 GRIP1Q9Y3R0 1128 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 R4GMQ9 66 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 TMEM269A0A1B0GVZ9 245 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 ACOD1A6NK06 481 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 ABCD4O14678 606 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 LOXP28300 417 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 SLC6A9P48067 706 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 ZNF121P58317 390 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 FDX2Q6P4F2 183 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 TSPAN14Q8NG11 270 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 RORBQ92753 470 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 RADILQ96JH8 1075 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 SP140LQ9H930 580 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 BABAM2Q9NXR7 383 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 EIF3KQ9UBQ5 218 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 ROS1P08922 2347 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 CSMD1Q96PZ7 3565 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 RPP14O95059 124 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 PNPP00491 289 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 CD3EP07766 207 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 GBX2P52951 348 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 EMX1Q04741 257 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 SPOCK1Q08629 439 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 UNQ6126/PRO20091Q6UXV3 157 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 NAA40Q86UY6 237 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 ZNF101Q8IZC7 436 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 GATAD2BQ8WXI9 593 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 APOBEC3DQ96AK3 386 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 TMEM204Q9BSN7 226 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 MOB1AQ9H8S9 216 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 ACOT13Q9NPJ3 140 aa17.12■□□□□ 0.33
PDLIM2-221ENST00000622702 PDZD2O15018 2839 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 POLQO75417 2590 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 A0A087WXM4 84 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 ATP6V1G2-DDX39BF2Z307 99 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 LOC110117498-PIK3R3F6TDL0 507 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 SMPD2O60906 423 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 LCATP04180 440 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 SLC2A1P11166 492 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 NR4A1P22736 598 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 MAP2K4P45985 399 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 TGM4P49221 684 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 UCP2P55851 309 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 MFGE8Q08431 387 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 SPHARQ15513 63 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 PIAS4Q8N2W9 510 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 TRIM36Q9NQ86 728 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 SPEF1Q9Y4P9 236 aa17.11■□□□□ 0.33
PDLIM2-221ENST00000622702 MAST4O15021 2626 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 TRIM64CA6NLI5 447 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 E9PI62 339 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 NGFP01138 241 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 ANXA2P07355 339 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 PCMT1P22061 227 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 PSMB10P40306 273 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 RAD52P43351 418 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 NKX6-1P78426 367 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 ACSM1Q08AH1 577 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 CCDC58Q4VC31 144 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 SLC22A25Q6T423 547 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 RFPL4BQ6ZWI9 263 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 CATSPERDQ86XM0 798 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 KLBQ86Z14 1044 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 C1orf174Q8IYL3 243 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 OR52H1Q8NGJ2 320 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 OR2G2Q8NGZ5 317 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 HS3ST6Q96QI5 342 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 OR5M11Q96RB7 305 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 BCL2L14Q9BZR8 327 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 G6PC2Q9NQR9 355 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 NUFIP1Q9UHK0 495 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 RNF115Q9Y4L5 304 aa17.1■□□□□ 0.33
PDLIM2-221ENST00000622702 NAV2Q8IVL1 2488 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 MAGEA13PA6NCF6 341 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 LALBAP00709 142 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 TUBG1P23258 451 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 ANOS1P23352 680 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 TAS2R43P59537 309 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 BDH1Q02338 343 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 DOC2BQ14184 412 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 SNAI3Q3KNW1 292 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 FAM57BQ71RH2 274 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 NUP37Q8NFH4 326 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 ABHD4Q8TB40 342 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 COG8Q96MW5 612 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms