RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-223	ENST00000617585	DOCK11	Q5JSL3	2073 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	FBN3	Q75N90	2809 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ISPD	A4D126	451 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	TMEM178B	H3BS89	294 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	PSKH1	P11801	424 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	CPT2	P23786	658 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	MMP16	P51512	607 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	BTG1	P62324	171 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	CRMP1	Q14194	572 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ATG16L2	Q8NAA4	619 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	LRGUK	Q96M69	825 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	CHID1	Q9BWS9	393 aa		18.82	■□□□□ 0.6
ARHGEF1-223	ENST00000617585		F5H0A9	414 aa	Predicted RBP	18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585		M0R135	149 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	FOXH1	O75593	365 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SBK2	P0C263	348 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	GATA4	P43694	442 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SRP9	P49458	86 aa	Known RBP	18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	BLVRA	P53004	296 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SRSF2	Q01130	221 aa	Known RBP	18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	HNRNPA0	Q13151	305 aa	Known RBP	18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ZMYND11	Q15326	602 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	DCAF12L2	Q5VW00	463 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	TRPM8	Q7Z2W7	1104 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	C1QL2	Q7Z5L3	287 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	KLHL36	Q8N4N3	616 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	CELF2-AS1	Q8N7Q2	184 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	OR10G2	Q8NGC3	310 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ST7L	Q8TDW4	575 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SPTSSA	Q969W0	71 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ZNF799	Q96GE5	643 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	NIPSNAP1	Q9BPW8	284 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	THTPA	Q9BU02	230 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	CMC2	Q9NRP2	79 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	TMEM100	Q9NV29	134 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ARMC1	Q9NVT9	282 aa		18.81	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	TVP23A	A6NH52	213 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585		A8MXK9	166 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585		H0YL77	283 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	CST1	P01037	141 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	LCAT	P04180	440 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SPI1	P17947	270 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ZFP36	P26651	326 aa	Known RBP	18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	FMO3	P31513	532 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	RPS27	P42677	84 aa	Known RBP	18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SLC6A9	P48067	706 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ENTPD1	P49961	510 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	MALL	Q13021	153 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	LINC01590	Q5TEZ4	76 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SHQ1	Q6PI26	577 aa	Known RBP	18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	LYPD4	Q6UWN0	246 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	DRAM2	Q6UX65	266 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	OR10AD1	Q8NGE0	317 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	OR51L1	Q8NGJ5	315 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	OR9Q1	Q8NGQ5	310 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	CCDC124	Q96CT7	223 aa	Known RBP	18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	FEV	Q99581	238 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	WDR76	Q9H967	626 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	UBAP1	Q9NZ09	502 aa		18.8	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SOX14	O95416	240 aa		18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	FSHB	P01225	129 aa		18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	IFNG	P01579	166 aa		18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	RBMX	P38159	391 aa	Known RBP	18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	MDH2	P40926	338 aa	Known RBP	18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	USP43	Q70EL4	1123 aa		18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	PGAP1	Q75T13	922 aa		18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	DCXR	Q7Z4W1	244 aa		18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	MUC20	Q8N307	709 aa	Predicted RBP	18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	GIPC3	Q8TF64	312 aa		18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ZFAND2B	Q8WV99	257 aa		18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	CANT1	Q8WVQ1	401 aa		18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	REPIN1	Q9BWE0	567 aa	Known RBP	18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	OPN4	Q9UHM6	478 aa		18.79	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	LOC105371242	A0A075B767	164 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	GRK5	P34947	590 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	CD200	P41217	278 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	LCN2	P80188	198 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ZNF511	Q8NB15	262 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	BHLHE23	Q8NDY6	225 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SEMA6D	Q8NFY4	1073 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585		Q8TCH9	128 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ERGIC1	Q969X5	290 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SLCO4A1	Q96BD0	722 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	MARCH7	Q9H992	704 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	PCDHB10	Q9UN67	800 aa		18.78	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	DHRS12	A0PJE2	317 aa		18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585		F5H5P2	479 aa		18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ZNF593	O00488	134 aa	Predicted RBP	18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	CLU	P10909	449 aa		18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ZNF3	P17036	446 aa		18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	RAD23A	P54725	363 aa		18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	MAB21L1	Q13394	359 aa		18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SNAI3	Q3KNW1	292 aa		18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	DNAL1	Q4LDG9	190 aa		18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	RHOU	Q7L0Q8	258 aa		18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	TMEM179B	Q7Z7N9	219 aa		18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ZNF420	Q8TAQ5	688 aa	Predicted RBP	18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SLAMF6	Q96DU3	332 aa		18.77	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	KCNJ15	Q99712	375 aa		18.77	■□□□□ 0.6

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