RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PTCHD4Q6ZW05 846 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 JAZF1Q86VZ6 243 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 FITM2Q8N6M3 262 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 SPERTQ8NA61 448 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 OR10S1Q8NGN2 331 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 PITX2Q99697 317 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 KCTD14Q9BQ13 255 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 NDUFAF4Q9P032 175 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 ERVK-18Q9QC07 812 aa14.87□□□□□ -0.03
SHKBP1-227ENST00000602011 TRAV40A0A0B4J280 105 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 F5H5P2 479 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 P2RY10O00398 339 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 NME4O00746 187 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 GMDSO60547 372 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 SASH3O75995 380 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 PPP1R3DO95685 299 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 SLC6A6P31641 620 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 IFNGR2P38484 337 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 TPTEP56180 551 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 GK2Q14410 553 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 RSPO1Q2MKA7 263 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 PGAP1Q75T13 922 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 ZBTB46Q86UZ6 589 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 SPRYD4Q8WW59 207 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 DHRS1Q96LJ7 313 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 ERMAPQ96PL5 475 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 ATF6BQ99941 703 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 CCDC134Q9H6E4 229 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 FN3KRPQ9HA64 309 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 SRA1Q9HD15 236 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 SOX21Q9Y651 276 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 POMT1Q9Y6A1 747 aa14.86□□□□□ -0.03
SHKBP1-227ENST00000602011 DOCK11Q5JSL3 2073 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 IGLV1-36A0A0B4J1U3 117 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 H0YL77 283 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 GPANK1O95872 356 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 ACSM4P0C7M7 580 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 MAB21L1Q13394 359 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 MIDNQ504T8 468 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 Q6YL49 198 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 SPATC1Q76KD6 591 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 TSEN54Q7Z6J9 526 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 OR6V1Q8N148 313 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 PNLDC1Q8NA58 520 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 SLC26A10Q8NG04 563 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 SPTSSAQ969W0 71 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 C7orf34Q96L11 122 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 DCAF13Q9NV06 445 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 ZNF446Q9NWS9 450 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 ARMCX1Q9P291 453 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 RNF7Q9UBF6 113 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 CYB5R1Q9UHQ9 305 aa14.85□□□□□ -0.03
SHKBP1-227ENST00000602011 TRAV38-1A0A0B4J264 116 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 F5H5K5 113 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 HOXA3O43365 443 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 NDUFA7O95182 113 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 ZNF205O95201 554 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 PTBP3O95758 552 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 KNG1P01042 644 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 LCATP04180 440 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 NOS3P29474 1203 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 PMELP40967 661 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 PDCD1Q15116 288 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 GLYATQ6IB77 296 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 SLC18B1Q6NT16 456 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 CGB2Q6NT52 195 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 ZNF841Q6ZN19 808 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 C17orf107Q6ZR85 190 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 BHLHE23Q8NDY6 225 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 TBC1D15Q8TC07 691 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 CMTM5Q96DZ9 223 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 DMRTB1Q96MA1 342 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 ABCD2Q9UBJ2 740 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 VWFP04275 2813 aa14.84□□□□□ -0.03
SHKBP1-227ENST00000602011 IGHV3OR16-10A0A075B7F0 116 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 ZNF879B4DU55 563 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 LGALS8O00214 317 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 TNFRSF13BO14836 293 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 ECDO95905 644 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 HLA-DPB1P04440 258 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 MDKP21741 143 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 FXYD6P3P58550 94 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 FGF12P61328 243 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 TRAP1Q12931 704 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 OR8G1Q15617 311 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 DEFB112Q30KQ8 113 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 HSP90B2PQ58FF3 399 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 MRPL21Q7Z2W9 205 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 OR4C15Q8NGM1 316 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 GATAD2BQ8WXI9 593 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 SLCO4A1Q96BD0 722 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 TSSK2Q96PF2 358 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 NMNAT3Q96T66 252 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 TRIM15Q9C019 465 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 OPA3Q9H6K4 179 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 GORASP2Q9H8Y8 452 aa14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 MRPL15Q9P015 296 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-227ENST00000602011 TRBV4-1A0A0J9YWV2 114 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 FAM181BA6NEQ2 426 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 DCTN6O00399 190 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms