RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 POM121L2Q96KW2 1035 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 PGLYRP3Q96LB9 341 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 ZNF75AQ96N20 296 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 PDCD1LG2Q9BQ51 273 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 OR10A2Q9H208 303 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 CDH20Q9HBT6 801 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 CRNNQ9UBG3 495 aaPredicted RBP16.15■□□□□ 0.18
SSBP4-212ENST00000601919 SSR3Q9UNL2 185 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 DIDO1Q9BTC0 2240 aaKnown RBP16.15■□□□□ 0.18
SSBP4-212ENST00000601919 AIREO43918 545 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 LCATP04180 440 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 ISG15P05161 165 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 CCNOP22674 350 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 GADD45AP24522 165 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 KIR3DL2P43630 455 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 RPS25P62851 125 aaKnown RBP16.14■□□□□ 0.17
SSBP4-212ENST00000601919 PAMR1Q6UXH9 720 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 UNQ6126/PRO20091Q6UXV3 157 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 TMEM203Q969S6 136 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 DGCR14Q96DF8 476 aaKnown RBP16.14■□□□□ 0.17
SSBP4-212ENST00000601919 EIF3KQ9UBQ5 218 aaKnown RBP16.14■□□□□ 0.17
SSBP4-212ENST00000601919 ENPP5Q9UJA9 477 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 ZNF391Q9UJN7 358 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 SLC22A13Q9Y226 551 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 SF3B6Q9Y3B4 125 aaKnown RBP16.14■□□□□ 0.17
SSBP4-212ENST00000601919 N6AMT1Q9Y5N5 214 aa16.14■□□□□ 0.17
SSBP4-212ENST00000601919 KMT2BQ9UMN6 2715 aaPredicted RBP16.13■□□□□ 0.17
SSBP4-212ENST00000601919 KALRNO60229 2985 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 LOC100509620A0A075B734 347 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 TRDV1A0A1B0GX56 115 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 H3BSA7 217 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 ZNF701M0R085 212 aaPredicted RBP16.13■□□□□ 0.17
SSBP4-212ENST00000601919 RGS9O75916 674 aaPredicted RBP16.13■□□□□ 0.17
SSBP4-212ENST00000601919 AGFG2O95081 481 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 IGLV1-44P01699 117 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 SLC2A1P11166 492 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 ACHEP22303 614 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 CCKARP32238 428 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 SORDQ00796 357 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 TAB1Q15750 504 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 PRSS45Q7RTY3 260 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 CCDC54Q8NEL0 328 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 ABHD4Q8TB40 342 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 GPR148Q8TDV2 347 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 APOBEC3DQ96AK3 386 aaPredicted RBP16.13■□□□□ 0.17
SSBP4-212ENST00000601919 MS4A3Q96HJ5 214 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 C1QTNF5Q9BXJ0 243 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 RGCCQ9H4X1 137 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 EXOSC4Q9NPD3 245 aaKnown RBP16.13■□□□□ 0.17
SSBP4-212ENST00000601919 NGBQ9NPG2 151 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 NDRG3Q9UGV2 375 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 RSL24D1Q9UHA3 163 aaKnown RBP16.13■□□□□ 0.17
SSBP4-212ENST00000601919 HHLA2Q9UM44 414 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 GSTK1Q9Y2Q3 226 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 CEPT1Q9Y6K0 416 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 HIVEP3Q5T1R4 2406 aa16.13■□□□□ 0.17
SSBP4-212ENST00000601919 ZFYVE26Q68DK2 2539 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 A0A0U1RQV5 110 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 LOC100506127A0A0U1RQW1 187 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 A0A1B0GVI7 797 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 NKX2-6A6NCS4 301 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 J3QW42 95 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 TBX1O43435 398 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 GATBO75879 557 aaKnown RBP16.12■□□□□ 0.17
SSBP4-212ENST00000601919 GABARAPO95166 117 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 CLDN14O95500 239 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 TTRP02766 147 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 ZNF12P17014 697 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 MAPK3P27361 379 aaPredicted RBP16.12■□□□□ 0.17
SSBP4-212ENST00000601919 CRYBB2P43320 205 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 CD200R1LQ6Q8B3 271 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 COMMD2Q86X83 199 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 OR8B12Q8NGG6 310 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 OR5L1Q8NGL2 311 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 ITLN2Q8WWU7 325 aaPredicted RBP16.12■□□□□ 0.17
SSBP4-212ENST00000601919 PHYHIPQ92561 330 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 CHCHD6Q9BRQ6 235 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 C1QTNF6Q9BXI9 259 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 RBM38Q9H0Z9 239 aaKnown RBP16.12■□□□□ 0.17
SSBP4-212ENST00000601919 OR51E2Q9H255 320 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 SLC24A3Q9HC58 644 aa16.12■□□□□ 0.17
SSBP4-212ENST00000601919 XRCC2O43543 280 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 ZG16O60844 167 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 CECR9P0C854 216 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 CFL1P23528 166 aaKnown RBP16.11■□□□□ 0.17
SSBP4-212ENST00000601919 FGF9P31371 208 aaPredicted RBP16.11■□□□□ 0.17
SSBP4-212ENST00000601919 FABP5Q01469 135 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 MALLQ13021 153 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 ODF4Q2M2E3 257 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 NAA40Q86UY6 237 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 AKAP1Q92667 903 aaKnown RBP eCLIP16.11■□□□□ 0.17
SSBP4-212ENST00000601919 ITFG2Q969R8 447 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 ISOC1Q96CN7 298 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 KCNS3Q9BQ31 491 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 MED18Q9BUE0 208 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 TBCCD1Q9NVR7 557 aa16.11■□□□□ 0.17
SSBP4-212ENST00000601919 LOC107986453A0A1B0GWG9 222 aa16.1■□□□□ 0.17
SSBP4-212ENST00000601919 GABRPO00591 440 aa16.1■□□□□ 0.17
SSBP4-212ENST00000601919 SYT7O43581 403 aa16.1■□□□□ 0.17
SSBP4-212ENST00000601919 MTRF1O75570 445 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms