RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CDC20BQ86Y33 519 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 CLECL1Q8IZS7 167 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC43A2Q8N370 569 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 FAM71CQ8NEG0 241 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR6K3Q8NGY3 331 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR5W2Q8NH69 310 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR10D3Q8NH80 312 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR2V1Q8NHB1 315 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 FNDC9Q8TBE3 224 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 GPR119Q8TDV5 335 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 ST8SIA1Q92185 356 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 NSMAFQ92636 917 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 CDS1Q92903 461 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 CPNE4Q96A23 557 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC35G5Q96KT7 338 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 RNF145Q96MT1 663 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 CCDC115Q96NT0 180 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 FOXC2Q99958 501 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 PINK1Q9BXM7 581 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF350Q9GZX5 532 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 PLEKHF2Q9H8W4 249 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMBIM4Q9HC24 238 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 FANCFQ9NPI8 374 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 EXOSC3Q9NQT5 275 aaKnown RBP2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 EXD2Q9NVH0 621 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 AIG1Q9NVV5 245 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 MCTS1Q9ULC4 181 aaKnown RBP2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 LIPT1Q9Y234 373 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 RPH3AQ9Y2J0 694 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 MMP24Q9Y5R2 645 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 GMEB1Q9Y692 573 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 KCNE3Q9Y6H6 103 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 USF3Q68DE3 2245 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 NIPBLQ6KC79 2804 aaeCLIP2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 FBN3Q75N90 2809 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 LOC105371242A0A075B767 164 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 RNF103-CHMP3A0A140T963 221 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 H0YC42 278 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 HMGN4O00479 90 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 CASKO14936 926 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 EFNA2O43921 213 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 CXCL13O43927 109 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 KIAA0513O60268 411 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 FCMRO60667 390 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 PRAF2O60831 178 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 TGDSO95455 350 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 CSTAP01040 98 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 IL6P05231 212 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR12D1P0DN82 309 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 POU2F1P14859 743 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 IDO1P14902 403 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 PGCP20142 388 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 PSMB1P20618 241 aaKnown RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 RPS4Y1P22090 263 aaKnown RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 CRYGSP22914 178 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 IL12AP29459 219 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 AGTR1P30556 359 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 DUTP33316 252 aaKnown RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 UGT2B10P36537 528 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC6A8P48029 635 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 KHKP50053 298 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 IST1P53990 364 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 CARD18P57730 90 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 MAGOHP61326 146 aaKnown RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 FUT5Q11128 374 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 FOXF1Q12946 379 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 SELENBP1Q13228 472 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 SKP2Q13309 424 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 PDK3Q15120 406 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF239Q16600 458 aaKnown RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZSWIM7Q19AV6 140 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 GLIPR1L2Q4G1C9 344 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 SPANXN4Q5MJ08 99 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 PDZK1Q5T2W1 519 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 C1QTNF12Q5T7M4 302 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 ATAD3BQ5T9A4 648 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 HBMQ6B0K9 141 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 C3orf33Q6P1S2 294 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 EPGNQ6UW88 154 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 PAMR1Q6UXH9 720 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 LRRC74BQ6ZQY2 392 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 EIF3MQ7L2H7 374 aaKnown RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 SSX8Q7RTT4 187 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 GALNT10Q86SR1 603 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 LUZP2Q86TE4 346 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 ANKRD46Q86W74 232 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 UBQLNLQ8IYU4 475 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 GCNT2Q8N0V5 402 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 LRRC75A-AS1Q8N1F1 130 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF619Q8N2I2 560 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 TRIML2Q8N7C3 387 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 GATSQ8NAP1 163 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 Q8NBF4 154 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR5D16Q8NGK9 328 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR4A15Q8NGL6 344 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR5M1Q8NGP8 315 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR5AK3PQ8NH89 298 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 C11orf45Q8TAV5 145 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 LINC01560Q8TB33 94 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 FBXO30Q8TB52 745 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms