RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 BRD7Q9NPI1 651 aa6.4□□□□□ -1.38
NPC1-208ENST00000590301 RPRD1BQ9NQG5 326 aaKnown RBP6.4□□□□□ -1.38
NPC1-208ENST00000590301 PTTG3PQ9NZH4 202 aa6.4□□□□□ -1.38
NPC1-208ENST00000590301 ACTR3BQ9P1U1 418 aa6.4□□□□□ -1.38
NPC1-208ENST00000590301 OR5V1Q9UGF6 321 aa6.4□□□□□ -1.38
NPC1-208ENST00000590301 OPN4Q9UHM6 478 aa6.4□□□□□ -1.38
NPC1-208ENST00000590301 LRCH1Q9Y2L9 728 aa6.4□□□□□ -1.38
NPC1-208ENST00000590301 V9GYQ6 96 aa6.4□□□□□ -1.38
NPC1-208ENST00000590301 TNFRSF11BO00300 401 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 AVPP01185 164 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 HLA-DQA2P01906 255 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 ACSM4P0C7M7 580 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 ZNF823P16415 610 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 ZNF12P17014 697 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 HOXB6P17509 224 aaKnown RBP6.39□□□□□ -1.39
NPC1-208ENST00000590301 ZFP36P26651 326 aaKnown RBP6.39□□□□□ -1.39
NPC1-208ENST00000590301 GGT2P36268 569 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 MAGEA2P43356 314 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 BLVRAP53004 296 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 GNGT1P63211 74 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 ACTG1P63261 375 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.39□□□□□ -1.39
NPC1-208ENST00000590301 TRAP1Q12931 704 aaKnown RBP6.39□□□□□ -1.39
NPC1-208ENST00000590301 ZNF154Q13106 437 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 HLXQ14774 488 aaPredicted RBP6.39□□□□□ -1.39
NPC1-208ENST00000590301 KCNJ8Q15842 424 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 MEP1BQ16820 701 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 ARMCX4Q5H9R4 360 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 OR2T2Q6IF00 324 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 CFAP77Q6ZQR2 320 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 RASSF6Q6ZTQ3 369 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 NLRC3Q7RTR2 1065 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.39□□□□□ -1.39
NPC1-208ENST00000590301 KLBQ86Z14 1044 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 DEFB107AQ8IZN7 70 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 OR5AS1Q8N127 324 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 DEFB108BQ8NET1 73 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 OR10AD1Q8NGE0 317 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 OR52E2Q8NGJ4 325 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 Q8TCH9 128 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 PLEKHA8Q96JA3 519 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 SIGLEC11Q96RL6 698 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 MAGIXQ9H6Y5 334 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 TRIM36Q9NQ86 728 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 DDX28Q9NUL7 540 aaKnown RBP6.39□□□□□ -1.39
NPC1-208ENST00000590301 TMEM100Q9NV29 134 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 ARL8BQ9NVJ2 186 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 IL20Q9NYY1 176 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 MIOXQ9UGB7 285 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 BAIAP2Q9UQB8 552 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 LYVE1Q9Y5Y7 322 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 AUP1Q9Y679 476 aa6.39□□□□□ -1.39
NPC1-208ENST00000590301 HEATR1Q9H583 2144 aaKnown RBP6.38□□□□□ -1.39
NPC1-208ENST00000590301 TMEM89A2RUT3 159 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 OR6C68A6NDL8 312 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 CEACAM18A8MTB9 384 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 F5H5K5 113 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 M0R135 149 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 BHLHE40O14503 412 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 GMDSO60547 372 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 CCNB2O95067 398 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 LCATP04180 440 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 WNT2P09544 360 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 IRF2P14316 349 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 OTX1P32242 354 aaPredicted RBP6.38□□□□□ -1.39
NPC1-208ENST00000590301 CD200P41217 278 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 ERFP50548 548 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 SLC25A1P53007 311 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 RAD23AP54725 363 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 MZT1Q08AG7 82 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 POU4F2Q12837 409 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 GK2Q14410 553 aaPredicted RBP6.38□□□□□ -1.39
NPC1-208ENST00000590301 C21orf62-AS1Q17RA5 79 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 RSPO1Q2MKA7 263 aaPredicted RBP6.38□□□□□ -1.39
NPC1-208ENST00000590301 SPRNQ5BIV9 151 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 SLC35F1Q5T1Q4 408 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 ZNF770Q6IQ21 691 aaPredicted RBP6.38□□□□□ -1.39
NPC1-208ENST00000590301 CORO6Q6QEF8 472 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 DRAM2Q6UX65 266 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 BTNL3Q6UXE8 466 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 LRRN1Q6UXK5 716 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 PGAP1Q75T13 922 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 SPATC1Q76KD6 591 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 DOK3Q7L591 496 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 MRPL21Q7Z2W9 205 aaKnown RBP6.38□□□□□ -1.39
NPC1-208ENST00000590301 LNX2Q8N448 690 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 SPERTQ8NA61 448 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 SDR9C7Q8NEX9 313 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 PROKR2Q8NFJ6 384 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 OR2T33Q8NG76 320 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 OR11L1Q8NGX0 322 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 SPRYD4Q8WW59 207 aaPredicted RBP6.38□□□□□ -1.39
NPC1-208ENST00000590301 GCDHQ92947 438 aaPredicted RBP6.38□□□□□ -1.39
NPC1-208ENST00000590301 DVL3Q92997 716 aaPredicted RBP6.38□□□□□ -1.39
NPC1-208ENST00000590301 NEIL1Q96FI4 390 aaPredicted RBP6.38□□□□□ -1.39
NPC1-208ENST00000590301 ZNF799Q96GE5 643 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 SLC6A7Q99884 636 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 SSBP3Q9BWW4 388 aaPredicted RBP6.38□□□□□ -1.39
NPC1-208ENST00000590301 SP140LQ9H930 580 aa6.38□□□□□ -1.39
NPC1-208ENST00000590301 TMEM165Q9HC07 324 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms