RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 LINC01590Q5TEZ4 76 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 C1orf140Q5VVS0 124 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 LRRC18Q8N456 261 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 ZNF565Q8N9K5 539 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 CLEC1AQ8NC01 280 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 NT5CQ8TCD5 201 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 URM1Q9BTM9 101 aaKnown RBP9.5□□□□□ -0.89
RNF43-207ENST00000583753 SFXN1Q9H9B4 322 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 SPACA1Q9HBV2 294 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 ZFP57Q9NU63 452 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 PIAS3Q9Y6X2 628 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 CDH23Q9H251 3354 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 ANAPC1Q9H1A4 1944 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 ARG1P05089 322 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 CT45A8P0DMV1 189 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 CT45A9P0DMV2 189 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 GLRA1P23415 457 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 CD1CP29017 333 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 OPRM1P35372 400 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 CYCSP99999 105 aaKnown RBP9.5□□□□□ -0.89
RNF43-207ENST00000583753 RAB32Q13637 225 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 INPP5JQ15735 1006 aaPredicted RBP9.5□□□□□ -0.89
RNF43-207ENST00000583753 PHLDA2Q53GA4 152 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 CT45A2Q5DJT8 189 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 RPL7L1Q6DKI1 246 aaKnown RBP9.5□□□□□ -0.89
RNF43-207ENST00000583753 OR51F2Q8NH61 342 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 FNDC9Q8TBE3 224 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 NICN1Q9BSH3 213 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 TMPRSS13Q9BYE2 586 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 METTL7AQ9H8H3 244 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 KLK13Q9UKR3 277 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 RBM7Q9Y580 266 aaKnown RBP9.5□□□□□ -0.89
RNF43-207ENST00000583753 ALPK3Q96L96 1907 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 TRAV36DV7A0A075B6V5 113 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 TRBV23-1A0A0A0MS06 115 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 BET1O15155 118 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 TUBG1P23258 451 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 PDCD1Q15116 288 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 USF2Q15853 346 aaPredicted RBP9.5□□□□□ -0.89
RNF43-207ENST00000583753 FAM109BQ6ICB4 259 aaPredicted RBP9.5□□□□□ -0.89
RNF43-207ENST00000583753 BRICD5Q6PL45 260 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 SLC36A1Q7Z2H8 476 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 OR1M1Q8NGA1 313 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 FAM213BQ8TBF2 198 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 THRSPQ92748 146 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 BMFQ96LC9 184 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 OR5B2Q96R09 309 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 FOXQ1Q9C009 403 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 KCNJ16Q9NPI9 418 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.5□□□□□ -0.89
RNF43-207ENST00000583753 SLC2A4RGQ9NR83 387 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 PLEKHJ1Q9NW61 149 aa9.5□□□□□ -0.89
RNF43-207ENST00000583753 PHF3Q92576 2039 aaKnown RBP9.49□□□□□ -0.89
RNF43-207ENST00000583753 FAM230AA0A1W2PPH8 454 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 G3V3Y1 287 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 TXNDC12O95881 172 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 SFTA3P0C7M3 94 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 S100A2P29034 98 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 ZNF117Q03924 483 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 SECTM1Q8WVN6 248 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 ASB17Q8WXJ9 295 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 LCORQ96JN0 433 aaPredicted RBP9.49□□□□□ -0.89
RNF43-207ENST00000583753 VSTM2LQ96N03 204 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 NDRG3Q9UGV2 375 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 PURGQ9UJV8 347 aaKnown RBP9.49□□□□□ -0.89
RNF43-207ENST00000583753 RAB22AQ9UL26 194 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 RNF215Q9Y6U7 377 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 TRAV14DV4A0A0A6YYC5 116 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 A0A1W2PNR3 127 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 OR6C65A6NJZ3 312 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 NUDT21O43809 227 aaKnown RBP9.49□□□□□ -0.89
RNF43-207ENST00000583753 ZNF44P15621 663 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 MEOX2P50222 304 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 ZNF674Q2M3X9 581 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 UNQ9370/PRO34162Q6UXP9 181 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 TFAP2EQ6VUC0 442 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 CDC20BQ86Y33 519 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 ZNF595Q8IYB9 648 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 TMEM229BQ8NBD8 167 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 TMEM104Q8NE00 496 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 OR2I1PQ8NGU4 316 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 RXFP4Q8TDU9 374 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 ASB5Q8WWX0 329 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 PFDN5Q99471 154 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 RBM24Q9BX46 236 aaKnown RBP9.49□□□□□ -0.89
RNF43-207ENST00000583753 AMDHD2Q9Y303 409 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 NPTNQ9Y639 398 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 LOC101059948A0A1B0GTJ6 334 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 NME1P15531 152 aaKnown RBP9.49□□□□□ -0.89
RNF43-207ENST00000583753 EGR3Q06889 387 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 RSPO4Q2I0M5 234 aaPredicted RBP9.49□□□□□ -0.89
RNF43-207ENST00000583753 C14orf28Q4W4Y0 310 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 OR52N5Q8NH56 324 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 GPX8Q8TED1 209 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 SDHAF3Q9NRP4 125 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 ASH2LQ9UBL3 628 aa9.49□□□□□ -0.89
RNF43-207ENST00000583753 GVINP1Q7Z2Y8 2422 aa9.48□□□□□ -0.89
RNF43-207ENST00000583753 hCG_1809904A0A1W2PP81 198 aa9.48□□□□□ -0.89
RNF43-207ENST00000583753 A0A1W2PR64 198 aa9.48□□□□□ -0.89
RNF43-207ENST00000583753 A0A1W2PRV1 198 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms