RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ZNF275Q9NSD4 429 aaPredicted RBP12.29□□□□□ -0.44
MKS1-207ENST00000578789 IGHV1-69-2A0A0G2JMI3 117 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 IQCF6A8MYZ5 107 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 PRKYO43930 277 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 SELENOFO60613 162 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 LILRA1O75019 489 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 LCATP04180 440 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 IGHV4-31P0DP07 118 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 SELEP16581 610 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 TMEM33P57088 247 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 APOFQ13790 326 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 USP51Q70EK9 711 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 NAA40Q86UY6 237 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 ZNF454Q8N9F8 522 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 OTOSQ8NHW6 89 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 EGLN1Q9GZT9 426 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 CENPMQ9NSP4 180 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 DECR2Q9NUI1 292 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 USE1Q9NZ43 259 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 FN1P02751 2386 aaKnown RBP12.28□□□□□ -0.44
MKS1-207ENST00000578789 C2CD3Q4AC94 2353 aa12.28□□□□□ -0.44
MKS1-207ENST00000578789 A0A1B0GWJ7 208 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 TLX2O43763 284 aaPredicted RBP12.27□□□□□ -0.45
MKS1-207ENST00000578789 ANOS1P23352 680 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 OPRL1P41146 370 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 SLC15A1P46059 708 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 GPR6P46095 362 aaPredicted RBP12.27□□□□□ -0.45
MKS1-207ENST00000578789 SLC6A9P48067 706 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 CHN2P52757 468 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 RPS7P62081 194 aaKnown RBP12.27□□□□□ -0.45
MKS1-207ENST00000578789 MALLQ13021 153 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 GK2Q14410 553 aaPredicted RBP12.27□□□□□ -0.45
MKS1-207ENST00000578789 TAF13Q15543 124 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 SNAI3Q3KNW1 292 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 LCN1P1Q5VSP4 162 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 AADACL4Q5VUY2 407 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 OR2T2Q6IF00 324 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 OR8G5Q8NG78 346 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 TMEM163Q8TC26 289 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 ELMOD3Q96FG2 381 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 AMELYQ99218 206 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 S100A14Q9HCY8 104 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 NF1P21359 2839 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 HIVEP2P31629 2446 aa12.27□□□□□ -0.45
MKS1-207ENST00000578789 ABCA2Q9BZC7 2435 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 M0R129 80 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 EI24O14681 340 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 TPD52L2O43399 206 aaKnown RBP12.26□□□□□ -0.45
MKS1-207ENST00000578789 CDC14BO60729 498 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 ALPLP05186 524 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 LYNP07948 512 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 HOXB4P17483 251 aaPredicted RBP12.26□□□□□ -0.45
MKS1-207ENST00000578789 TNFSF4P23510 183 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 NAA10P41227 235 aaPredicted RBP12.26□□□□□ -0.45
MKS1-207ENST00000578789 CX3CR1P49238 355 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 GZMKP49863 264 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 PRKXP51817 358 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 TNFAIP6P98066 277 aaPredicted RBP12.26□□□□□ -0.45
MKS1-207ENST00000578789 TRIP10Q15642 601 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 C6orf52Q5T4I8 152 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 NXNL2Q5VZ03 156 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 SPATC1Q76KD6 591 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 SLC16A9Q7RTY1 509 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 OR5AS1Q8N127 324 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 ZNF283Q8N7M2 679 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 TCEANCQ8N8B7 351 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 HPS1Q92902 700 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 ZNF582Q96NG8 517 aaPredicted RBP12.26□□□□□ -0.45
MKS1-207ENST00000578789 TEAD3Q99594 435 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 SLC30A2Q9BRI3 323 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 YIPF3Q9GZM5 350 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 RIBC2Q9H4K1 309 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 OPA3Q9H6K4 179 aa12.26□□□□□ -0.45
MKS1-207ENST00000578789 SETD2Q9BYW2 2564 aaPredicted RBP12.26□□□□□ -0.45
MKS1-207ENST00000578789 LRP5LA4QPB2 252 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 C5orf63A6NC05 138 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 INAFM1C9JVW0 142 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 APOC1P02654 83 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 SLC2A1P11166 492 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 ZNF16P17020 682 aaPredicted RBP12.25□□□□□ -0.45
MKS1-207ENST00000578789 ALOX5APP20292 161 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 HSD11B1P28845 292 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 POLR2IP36954 125 aaKnown RBP12.25□□□□□ -0.45
MKS1-207ENST00000578789 ALDH3A2P51648 485 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 HFEQ30201 348 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 SPRNQ5BIV9 151 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 GLYATL3Q5SZD4 288 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 CYB5R2Q6BCY4 276 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 PGAP1Q75T13 922 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 PRSS45Q7RTY3 260 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 MRPL21Q7Z2W9 205 aaKnown RBP12.25□□□□□ -0.45
MKS1-207ENST00000578789 OR2Z1Q8NG97 314 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 OR13G1Q8NGZ3 307 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 SPSB4Q96A44 273 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 C1orf159Q96HA4 380 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 REPIN1Q9BWE0 567 aaKnown RBP12.25□□□□□ -0.45
MKS1-207ENST00000578789 IL19Q9UHD0 177 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 KLHDC2Q9Y2U9 406 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 CACNG2Q9Y698 323 aa12.25□□□□□ -0.45
MKS1-207ENST00000578789 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.25□□□□□ -0.459e-7■■■■■ 26.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms