RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 TFP02787 698 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 MT-ND2P03891 347 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 CST2P09228 141 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 OR2T7P0C7T2 308 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 DAOP14920 347 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 MSR1P21757 451 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 STOMP27105 288 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 ALDH3B1P43353 468 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 GDI2P50395 445 aaKnown RBP12.43□□□□□ -0.42
COMMD4-225ENST00000569245 UCP2P55851 309 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 ACTC1P68032 377 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 ACTA1P68133 377 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 PSG4Q00888 419 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 MVKQ03426 396 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 PCK2Q16822 640 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 MSMPQ1L6U9 139 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 TEX30Q5JUR7 227 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 LYPD4Q6UWN0 246 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 LRP11Q86VZ4 500 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 OR2T27Q8NH04 317 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 NEU4Q8WWR8 484 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-225ENST00000569245 C11orf40Q8WZ69 217 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 FOXN4Q96NZ1 517 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 INTS14Q96SY0 518 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 MRPS26Q9BYN8 205 aaKnown RBP12.43□□□□□ -0.42
COMMD4-225ENST00000569245 YIPF3Q9GZM5 350 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 CCDC90BQ9GZT6 254 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 MS4A5Q9H3V2 200 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 MYOZ1Q9NP98 299 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-225ENST00000569245 EIF3KQ9UBQ5 218 aaKnown RBP12.43□□□□□ -0.42
COMMD4-225ENST00000569245 SCOCQ9UIL1 159 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 EXOSC1Q9Y3B2 195 aaKnown RBP12.43□□□□□ -0.42
COMMD4-225ENST00000569245 TIMM10BQ9Y5J6 103 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 SNX5Q9Y5X3 404 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 COMMD3-BMI1R4GMX3 469 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 NSD1Q96L73 2696 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-225ENST00000569245 HIVEP2P31629 2446 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 C5orf49A4QMS7 147 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 TVP23AA6NH52 213 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 NDUFS8O00217 210 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 SELENOFO60613 162 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 APOL3O95236 402 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 GPANK1O95872 356 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 HLA-DQA2P01906 255 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 MRPL3P09001 348 aaKnown RBP12.42□□□□□ -0.42
COMMD4-225ENST00000569245 USF1P22415 310 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-225ENST00000569245 NAA10P41227 235 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-225ENST00000569245 ENTPD1P49961 510 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 NKPD1Q17RQ9 610 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 ALKBH6Q3KRA9 238 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 SHFQ7M4L6 423 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 ERI1Q8IV48 349 aaKnown RBP12.42□□□□□ -0.42
COMMD4-225ENST00000569245 SLC35F2Q8IXU6 374 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 SVOPQ8N4V2 548 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 ACBD7Q8N6N7 88 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 SYNPRQ8TBG9 265 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 ZNF649Q9BS31 505 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 BCL2L14Q9BZR8 327 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 OR2H1Q9GZK4 316 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 WDR76Q9H967 626 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 EMC7Q9NPA0 242 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 POLE4Q9NR33 117 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 YAE1D1Q9NRH1 226 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 GPR160Q9UJ42 338 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 KCNG2Q9UJ96 466 aa12.42□□□□□ -0.42
COMMD4-225ENST00000569245 ZNF593O00488 134 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-225ENST00000569245 CD5LO43866 347 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 MPZL1O95297 269 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 SCG5P05408 212 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 LIMS3P0CW19 117 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 LIMS4P0CW20 117 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 NAT2P11245 290 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 ATP6V1B1P15313 513 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 ZNF823P16415 610 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 MYL12AP19105 171 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 PCMT1P22061 227 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 NR4A2P43354 598 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 KLF3P57682 345 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-225ENST00000569245 LSM6P62312 80 aaKnown RBP12.41□□□□□ -0.42
COMMD4-225ENST00000569245 EMX1Q04741 257 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-225ENST00000569245 LOXL1Q08397 574 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-225ENST00000569245 TBCEQ15813 527 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-225ENST00000569245 TMEM249Q2WGJ8 235 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 ZNF774Q6NX45 483 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 TMEM154Q6P9G4 183 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 UNQ6126/PRO20091Q6UXV3 157 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 ZNF454Q8N9F8 522 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 OR10H4Q8NGA5 316 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 OR1J1Q8NGS3 322 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 UBASH3BQ8TF42 649 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 MYCBPQ99417 103 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-225ENST00000569245 ZNF416Q9BWM5 594 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 WNT5BQ9H1J7 359 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 CHCHD3Q9NX63 227 aaKnown RBP12.41□□□□□ -0.42
COMMD4-225ENST00000569245 ERVK13-1Q9NX77 482 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 TAAR3PQ9P1P4 343 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 MYEF2Q9P2K5 600 aaKnown RBP12.41□□□□□ -0.42
COMMD4-225ENST00000569245 TMEM14AQ9Y6G1 99 aa12.41□□□□□ -0.42
COMMD4-225ENST00000569245 LOC100509620A0A075B734 347 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 DAPL1A0PJW8 107 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms