RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 FGD2Q7Z6J4 655 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 GLRX5Q86SX6 157 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 SLC22A24Q8N4F4 322 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 MEIOBQ8N635 442 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 PNLDC1Q8NA58 520 aaKnown RBP9.54□□□□□ -0.88
SPIDR-222ENST00000524006 OR1M1Q8NGA1 313 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 OR5D14Q8NGL3 314 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 OR6F1Q8NGZ6 308 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 OR52I2Q8NH67 350 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 OR56B4Q8NH76 319 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 CAPSLQ8WWF8 208 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 TMEM54Q969K7 222 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 FAM46BQ96A09 425 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 CPNE4Q96A23 557 aaPredicted RBP9.54□□□□□ -0.88
SPIDR-222ENST00000524006 FGGYQ96C11 551 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 GPN1Q9HCN4 374 aaPredicted RBP9.54□□□□□ -0.88
SPIDR-222ENST00000524006 EMC3Q9P0I2 261 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 KLF13Q9Y2Y9 288 aaPredicted RBP9.54□□□□□ -0.88
SPIDR-222ENST00000524006 MED12Q93074 2177 aa9.54□□□□□ -0.88
SPIDR-222ENST00000524006 NCOA6Q14686 2063 aaPredicted RBP9.54□□□□□ -0.88
SPIDR-222ENST00000524006 TRAV18A0A075B6X5 111 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 A0A0A6YYH2 397 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 A0A0J9YW62 118 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 A6NJ64 397 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 H0YC42 278 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 SSNA1O43805 119 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 CXCL13O43927 109 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 RAMP1O60894 148 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 CTAG2O75638 210 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 F10P00742 488 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 TTRP02766 147 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 ZNF24P17028 368 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 CD82P27701 267 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 PRSS3P35030 304 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 RRADP55042 308 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 GALK2Q01415 458 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 SSBP1Q04837 148 aaKnown RBP9.53□□□□□ -0.88
SPIDR-222ENST00000524006 SCRN3Q0VDG4 424 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 OR1C1Q15619 314 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 PCGF3Q3KNV8 242 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 PLA1AQ53H76 456 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 ELFN2Q5R3F8 820 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 GLYATL3Q5SZD4 288 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 OLFML2AQ68BL7 652 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 RAB12Q6IQ22 244 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 SLC25A25Q6KCM7 469 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 MTFR2Q6P444 385 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 ANKRD16Q6P6B7 361 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 FAM57BQ71RH2 274 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 CCDC54Q8NEL0 328 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 OR51E1Q8TCB6 317 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 DEDD2Q8WXF8 326 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 NKD1Q969G9 470 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 CPNE2Q96FN4 548 aaPredicted RBP9.53□□□□□ -0.88
SPIDR-222ENST00000524006 ZNF486Q96H40 463 aaPredicted RBP9.53□□□□□ -0.88
SPIDR-222ENST00000524006 FAM71F1Q96KD3 344 aaPredicted RBP9.53□□□□□ -0.88
SPIDR-222ENST00000524006 GPER1Q99527 375 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 ZNF416Q9BWM5 594 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 PRRG4Q9BZD6 226 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 C20orf85Q9H1P6 137 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 EXO5Q9H790 373 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 PROK2Q9HC23 129 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 TMEM138Q9NPI0 162 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 ZNF275Q9NSD4 429 aaPredicted RBP9.53□□□□□ -0.88
SPIDR-222ENST00000524006 MRPL15Q9P015 296 aaKnown RBP9.53□□□□□ -0.88
SPIDR-222ENST00000524006 CGGBP1Q9UFW8 167 aaPredicted RBP9.53□□□□□ -0.88
SPIDR-222ENST00000524006 ZNF222Q9UK12 451 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 ITGB1BP2Q9UKP3 347 aa9.53□□□□□ -0.88
SPIDR-222ENST00000524006 MRPS18CQ9Y3D5 142 aaKnown RBP9.53□□□□□ -0.88
SPIDR-222ENST00000524006 URB1O60287 2271 aaKnown RBP9.52□□□□□ -0.89
SPIDR-222ENST00000524006 TMEM272A0A1B0GTI8 110 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 LRRC3CA6NJW4 275 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 SMAD9O15198 467 aaKnown RBP9.52□□□□□ -0.89
SPIDR-222ENST00000524006 MTRF1O75570 445 aaKnown RBP9.52□□□□□ -0.89
SPIDR-222ENST00000524006 FARS2O95363 451 aaKnown RBP9.52□□□□□ -0.89
SPIDR-222ENST00000524006 BPNT1O95861 308 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 ITGA5P08648 1049 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 AKAIN1P0CW23 69 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 GTF2F2P13984 249 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 CD46P15529 392 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 IGFBP3P17936 291 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-222ENST00000524006 RAB6AP20340 208 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 PTH2RP49190 550 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 CCR6P51684 374 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 AGFG1P52594 562 aaKnown RBP9.52□□□□□ -0.89
SPIDR-222ENST00000524006 NKX2-5P52952 324 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-222ENST00000524006 RAG2P55895 527 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 PCBD1P61457 104 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 H3F3AP84243 136 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 ECH1Q13011 328 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 RAB35Q15286 201 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 HIST3H3Q16695 136 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 C2orf76Q3KRA6 126 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 SLC36A2Q495M3 483 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 DCAF10Q5QP82 559 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 AWAT2Q6E213 333 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 ZNF782Q6ZMW2 699 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-222ENST00000524006 LINC00696Q6ZRV3 163 aa9.52□□□□□ -0.89
SPIDR-222ENST00000524006 MCEMP1Q8IX19 187 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms