RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 PPIAL4CA0A0B4J2A2 164 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 LOC102723532A0A0G2JNH3 316 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 SPTY2D1-AS1A0A0U1RR47 76 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 TSPAN11A1L157 253 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 IGLON5A6NGN9 336 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 NPIPB13A6NJU9 1138 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 A8MVM7 634 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 TMEM229AB2RXF0 380 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 NPIPB4C9JG80 1138 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 PPIAL4DF5H284 164 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 GPR31O00270 319 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 SCDO00767 359 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 YY2O15391 372 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 FABP7O15540 132 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 OR6A2O95222 327 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 MT-ND4P03905 459 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ANXA2P07355 339 aaKnown RBP6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ADRA2AP08913 450 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 PPIAL4FP0DN26 164 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 NPPBP16860 134 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 FUT3P21217 361 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 MMP11P24347 488 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 SSTR4P31391 388 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 SLC6A6P31641 620 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ACVRL1P37023 503 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ARL4AP40617 200 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 GLP1RP43220 463 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 PPT1P50897 306 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 CLDN20P56880 219 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 OR10A3P58181 314 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 TAS2R41P59536 307 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 BAXQ07812 192 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 PPP1R8Q12972 351 aaKnown RBP6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ADPRMQ3LIE5 342 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 LGALSLQ3ZCW2 172 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-216ENST00000523088 FBLN7Q53RD9 439 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 TMEM244Q5VVB8 128 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ACSM6Q6P461 480 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 KIRREL2Q6UWL6 708 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 DHRS13Q6UX07 377 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 Q6ZSR6 202 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 AHSA2Q719I0 299 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 TMUB2Q71RG4 321 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 C5orf24Q7Z6I8 188 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 CD163Q86VB7 1156 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 P2RY8Q86VZ1 359 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 SPPL2CQ8IUH8 684 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 OR4N4Q8N0Y3 316 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 OR6V1Q8N148 313 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF664Q8N3J9 261 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 GALNT16Q8N428 558 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 SLC30A7Q8NEW0 376 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 NUP43Q8NFH3 380 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 OR13H1Q8NG92 308 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 OR5M3Q8NGP4 307 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 OR9G4Q8NGQ1 327 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 TNFAIP8L1Q8WVP5 186 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 HOXB13Q92826 284 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-216ENST00000523088 NAT6Q93015 286 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 TGM7Q96PF1 710 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ST6GALNAC5Q9BVH7 336 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 PRO1933Q9H354 126 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 TMEM231Q9H6L2 316 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ZBTB20Q9HC78 741 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-216ENST00000523088 TMPRSS4Q9NRS4 437 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 AURKAIP1Q9NWT8 199 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-216ENST00000523088 TAS2R14Q9NYV8 317 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF230Q9UIE0 474 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-216ENST00000523088 NXT1Q9UKK6 140 aaKnown RBP6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF346Q9UL40 294 aaKnown RBP6.74□□□□□ -1.33
HDAC3-216ENST00000523088 ST3GAL6Q9Y274 331 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 MEMO1Q9Y316 297 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 SHROOM3Q8TF72 1996 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 AKAP13Q12802 2813 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 CACNA1GO43497 2377 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 LRP4O75096 1905 aa6.74□□□□□ -1.33
HDAC3-216ENST00000523088 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-216ENST00000523088 FAM237BA0A1B0GVD1 139 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 A0A1W2PR80 420 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 OR5H15A6NDH6 313 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 WIPF3A6NGB9 483 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 OR5H1A6NKK0 313 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 KCNK3O14649 394 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 SPRY1O43609 319 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-216ENST00000523088 S1PR2O95136 353 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 UTS2O95399 124 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 CD160O95971 181 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 CST2P09228 141 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 OR13C7P0DN81 318 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 IL7RP16871 459 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 OMGP23515 440 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 EPHA2P29317 976 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 EPHA3P29320 983 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 ADRA1AP35348 466 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 NUMBP49757 651 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 HTR6P50406 440 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 AQP5P55064 265 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 PFN3P60673 137 aa6.73□□□□□ -1.33
HDAC3-216ENST00000523088 BTN3A2P78410 334 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms