RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 LRG1P02750 347 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 CD37P11049 281 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 IRF2P14316 349 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 FCGR2CP31995 323 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 OR1D2P34982 312 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 TSPAN7P41732 249 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 MMP16P51512 607 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF136P52737 540 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 C21orf58P58505 322 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 TAS2R19P59542 299 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SPEM2Q0P670 501 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 P2RY6Q15077 328 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ELOBQ15370 118 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 MEP1BQ16820 701 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 Q499Y3 187 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 HIST2H3PS2Q5TEC6 136 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 MYPOPQ86VE0 399 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SUMF2Q8NBJ7 301 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 OR1J1Q8NGS3 322 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SFXN5Q8TD22 340 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SERINC2Q96SA4 455 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 NDUFAF3Q9BU61 184 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 MFRPQ9BY79 579 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 DUSP15Q9H1R2 295 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 CWH43Q9H720 699 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 NEUROD4Q9HD90 331 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 UBQLN4Q9NRR5 601 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 AHSPQ9NZD4 102 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 UPB1Q9UBR1 384 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF443Q9Y2A4 671 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 PAPPA2Q9BXP8 1791 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 TRPM7Q96QT4 1865 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 MBLAC1A4D2B0 266 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF840PA6NDX5 716 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 DLEU1O43261 78 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 LDB3O75112 727 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 GALP22466 123 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC2A5P22732 501 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC11A1P49279 550 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ADPRHP54922 357 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 CLDN6P56747 220 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC26A5P58743 744 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC10A1Q14973 349 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 PLEKHS1Q5SXH7 462 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 RPUSD3Q6P087 351 aaKnown RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 DEGS2Q6QHC5 323 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 PLXDC2Q6UX71 529 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 COMMD1Q8N668 190 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 OR9K2Q8NGE7 335 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 RLN3Q8WXF3 142 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SMIM8Q96KF7 97 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 CAMK1GQ96NX5 476 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 CDC6Q99741 560 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 EFCAB11Q9BUY7 163 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ST6GALNAC5Q9BVH7 336 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 DUSP22Q9NRW4 184 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 TAS2R4Q9NYW5 299 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 MED31Q9Y3C7 131 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 WIF1Q9Y5W5 379 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 TRAV34A0A0B4J273 112 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 A0A1W2PP11 408 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 WIPF3A6NGB9 483 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 A6NIZ1 184 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF705FA8MVS1 300 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 F8VVB4 439 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 F8VWA3 439 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 EIF1AYO14602 144 aaKnown RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 RCBTB2O95199 551 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF705DP0CH99 300 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF705BP0CI00 300 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 GAAP10253 952 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 CEACAM1P13688 526 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 FUT3P21217 361 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 C5AR1P21730 350 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 PPM1AP35813 382 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SNCAP37840 140 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 CDKN2AP42771 156 aaKnown RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 RAP1BP61224 184 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ACTA2P62736 377 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ACTG2P63267 376 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ACTC1P68032 377 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ACTA1P68133 377 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 MRPS6P82932 125 aaKnown RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 RAB11BQ15907 218 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 CLEC2AQ6UVW9 174 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ADIPOR2Q86V24 386 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 CALHM1Q8IU99 346 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 MRPL41Q8IXM3 137 aaKnown RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF101Q8IZC7 436 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 OR4N2Q8NGD1 307 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 OR2AP1Q8NGE2 309 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 GPX8Q8TED1 209 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 RNF166Q96A37 237 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 CCDC74AQ96AQ1 378 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 CXorf40BQ96DE9 158 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC25A44Q96H78 314 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC25A31Q9H0C2 315 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 B9D1Q9UPM9 204 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 GAB2Q9UQC2 676 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 LIPGQ9Y5X9 500 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms