RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ZDHHC8Q9ULC8 765 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 MYO9AB2RTY4 2548 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 CHD3Q12873 2000 aaKnown RBP12.83□□□□□ -0.36
RNF4-210ENST00000508235 ZNF670-ZNF695F2Z2N8 137 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 XRCC2O43543 280 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 ZNF254O75437 659 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 NAT2P11245 290 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 ZNF81P51508 661 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 SLC34A1Q06495 639 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 ALKBH6Q3KRA9 238 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 FAM209AQ5JX71 171 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 OGFRL1Q5TC84 451 aaPredicted RBP12.82□□□□□ -0.36
RNF4-210ENST00000508235 TTC23Q5W5X9 447 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 MRPL21Q7Z2W9 205 aaKnown RBP12.82□□□□□ -0.36
RNF4-210ENST00000508235 NAA40Q86UY6 237 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 SLC35F2Q8IXU6 374 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 OR52H1Q8NGJ2 320 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 FAM168AQ92567 244 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 TPK1Q9H3S4 243 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 ADGRL4Q9HBW9 690 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 CLN6Q9NWW5 311 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 DNAJC27Q9NZQ0 273 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 CSMD2Q7Z408 3487 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 CCDC168Q8NDH2 2452 aa12.82□□□□□ -0.36
RNF4-210ENST00000508235 NDUFS8O00217 210 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 ANXA2P07355 339 aaKnown RBP12.81□□□□□ -0.36
RNF4-210ENST00000508235 SBK2P0C263 348 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 OR2T7P0C7T2 308 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 CD99P14209 185 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 DAOP14920 347 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 DCTDP32321 178 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 PDLIM4P50479 330 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 MMP15P51511 669 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 MRPS11P82912 194 aaKnown RBP12.81□□□□□ -0.36
RNF4-210ENST00000508235 ROM1Q03395 351 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 DNM1P46Q6ZS02 220 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 PGAP1Q75T13 922 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 ZCCHC24Q8N2G6 241 aaKnown RBP12.81□□□□□ -0.36
RNF4-210ENST00000508235 ZNF525Q8N782 197 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 OR51G2Q8NGK0 314 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 OR2T27Q8NH04 317 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 AMELYQ99218 206 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 POFUT1Q9H488 388 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 RNPEPL1Q9HAU8 725 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 DECR2Q9NUI1 292 aa12.81□□□□□ -0.36
RNF4-210ENST00000508235 TEX15Q9BXT5 2789 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 LOC390937A0A1W2PQ73 354 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 TBX1O43435 398 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 ADH4P08319 380 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 FOSL1P15407 271 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 TNFSF4P23510 183 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 CFL1P23528 166 aaKnown RBP12.8□□□□□ -0.36
RNF4-210ENST00000508235 MTNR1AP48039 350 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 HCCSP53701 268 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 ZNF121P58317 390 aaPredicted RBP12.8□□□□□ -0.36
RNF4-210ENST00000508235 CXCR4P61073 352 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 EGR3Q06889 387 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 GK2Q14410 553 aaPredicted RBP12.8□□□□□ -0.36
RNF4-210ENST00000508235 HLXQ14774 488 aaPredicted RBP12.8□□□□□ -0.36
RNF4-210ENST00000508235 SNAI3Q3KNW1 292 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 LRRN1Q6UXK5 716 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 ZNF771Q7L3S4 317 aaPredicted RBP12.8□□□□□ -0.36
RNF4-210ENST00000508235 ENTHD1Q8IYW4 607 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 ZNF679Q8IYX0 411 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 DHRSXQ8N5I4 330 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 ZNF540Q8NDQ6 660 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 SETD9Q8NE22 299 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 RHOXF1Q8NHV9 184 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 UBASH3BQ8TF42 649 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 UBE2FQ969M7 185 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 OR8B4Q96RC9 309 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 MYCBPQ99417 103 aaPredicted RBP12.8□□□□□ -0.36
RNF4-210ENST00000508235 EGLN1Q9GZT9 426 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 OR10A2Q9H208 303 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 RGCCQ9H4X1 137 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 IKZF2Q9UKS7 526 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 KLHDC2Q9Y2U9 406 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 LRP12Q9Y561 859 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 PCDHGB1Q9Y5G3 927 aa12.8□□□□□ -0.36
RNF4-210ENST00000508235 ACOD1A6NK06 481 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 IQCF6A8MYZ5 107 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 DLGAP1O14490 977 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 TPD52L2O43399 206 aaKnown RBP12.79□□□□□ -0.36
RNF4-210ENST00000508235 SPRY3O43610 288 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 ENTPD6O75354 484 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 LY6HO94772 140 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 SLC2A1P11166 492 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 SLC25A16P16260 332 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 RIDAP52758 137 aaKnown RBP12.79□□□□□ -0.36
RNF4-210ENST00000508235 PSMA6P60900 246 aaKnown RBP12.79□□□□□ -0.36
RNF4-210ENST00000508235 ACTC1P68032 377 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 ACTA1P68133 377 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 TNK1Q13470 666 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 IL18R1Q13478 541 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 TIGD6Q17RP2 521 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 ZNF829Q3KNS6 432 aaPredicted RBP12.79□□□□□ -0.36
RNF4-210ENST00000508235 TMEM255AQ5JRV8 349 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 ZNF322Q6U7Q0 402 aaPredicted RBP12.79□□□□□ -0.36
RNF4-210ENST00000508235 USP51Q70EK9 711 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 ZNF786Q8N393 782 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms