RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 DUOX1Q9NRD9 1551 aa3.7□□□□□ -1.82
HMGB1P3-201ENST00000502802 COL2A1P02458 1487 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 MKI67P46013 3256 aaKnown RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 A0A0J9YYE9 177 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 A0A1W2PPV4 95 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZNF99A8MXY4 864 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 SPOPO43791 374 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 SNAI1O95863 264 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 CSTAP01040 98 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 TRBC1P01850 177 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 HBE1P02100 147 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 S100A9P06702 114 aaKnown RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 STAG3L2P0CL84 134 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 CNR1P21554 472 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 LONP1P36776 959 aaKnown RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 NBL1P41271 181 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 TAF6P49848 677 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 ETV1P50549 477 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 RPS15AP62244 130 aaKnown RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 DAZ2Q13117 558 aaKnown RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 TRMT5Q32P41 509 aaKnown RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 COPS6Q7L5N1 327 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 MRPL21Q7Z2W9 205 aaKnown RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 FAM3DQ96BQ1 224 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 LRRC58Q96CX6 371 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 TSSK3Q96PN8 268 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 OR2M2Q96R28 347 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 OR2AG1Q9H205 316 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 TMEM38AQ9H6F2 299 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 SLCO1B3Q9NPD5 702 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 TMEM9BQ9NQ34 198 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 DAZ3Q9NR90 486 aaKnown RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZNF629Q9UEG4 869 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 PCYOX1Q9UHG3 505 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 NUFIP1Q9UHK0 495 aaKnown RBP3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 TRAPPC4Q9Y296 219 aa3.69□□□□□ -1.82
HMGB1P3-201ENST00000502802 A0A1B0GUL6 1792 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 HTTP42858 3142 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 ABCA7Q8IZY2 2146 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 ECM29Q5VYK3 1845 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 A0A1B0GUH1 482 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 PRSS37A4D1T9 235 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 PES1O00541 588 aaKnown RBP3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 TRAF3IP2O43734 574 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 HSBP1O75506 76 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 FLOT1O75955 427 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 AQP8O94778 261 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 TGM6O95932 706 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 INSP01308 110 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 IGLV1-47P01700 117 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 ARG1P05089 322 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 KRT16P08779 473 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 BMI1P35226 326 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 NUP62P37198 522 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 GPR1P46091 355 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 NCBP2P52298 156 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 SMARCB1Q12824 385 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 PON3Q15166 354 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZSCAN26Q16670 478 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 HSP90AA4PQ58FG1 418 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 UBE2UQ5VVX9 321 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 GPR107Q5VW38 600 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 TEX43Q6ZNM6 134 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZNF621Q6ZSS3 439 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 MYOCDQ8IZQ8 938 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 PDCL2Q8N4E4 241 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 FAM71E2Q8N5Q1 922 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 OR6X1Q8NH79 312 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 LKAAEAR1Q8TD35 194 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 MITD1Q8WV92 249 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 PIH1D2Q8WWB5 315 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 TOP1MTQ969P6 601 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 DNAJC19Q96DA6 116 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 PHYHIPLQ96FC7 376 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 MRM3Q9HC36 420 aaKnown RBP3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 LZTFL1Q9NQ48 299 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 CLN6Q9NWW5 311 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZNF226Q9NYT6 803 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 YARS2Q9Y2Z4 477 aaKnown RBP3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 MRPS18BQ9Y676 258 aaKnown RBP3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 COMMD3-BMI1R4GMX3 469 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 DENND4AQ7Z401 1863 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 NFASCO94856 1347 aa3.68□□□□□ -1.82
HMGB1P3-201ENST00000502802 PDE4DIPQ5VU43 2346 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 TSPAN11A1L157 253 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 KMOO15229 486 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 RAD51CO43502 376 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 FARS2O95363 451 aaKnown RBP3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 RAB3DO95716 219 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 BGLAPP02818 100 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 IGHV4-34P06331 123 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 TPM1P09493 284 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 UBTFL6P0CB48 400 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 NR2C1P13056 603 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 ZNF30P17039 623 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 F2RP25116 425 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 NUDT1P36639 197 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 RFC3P40938 356 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 RND2P52198 227 aa3.67□□□□□ -1.82
HMGB1P3-201ENST00000502802 NDPQ00604 133 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 177.6 ms