RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 MRASO14807 208 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 PTP4A3O75365 173 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 IRF2P14316 349 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 ANOS1P23352 680 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 CDKN2AP42771 156 aaKnown RBP11.32□□□□□ -0.6
SAMM50-204ENST00000493161 CENPAP49450 140 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 FXYD6P3P58550 94 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 KRTAP27-1Q3LI81 207 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 Q6ZSV7 163 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 TSEN54Q7Z6J9 526 aaKnown RBP11.32□□□□□ -0.6
SAMM50-204ENST00000493161 RNF113BQ8IZP6 322 aaKnown RBP11.32□□□□□ -0.6
SAMM50-204ENST00000493161 FGFRL1Q8N441 504 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 TBC1D15Q8TC07 691 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 FAM46AQ96IP4 442 aaKnown RBP11.32□□□□□ -0.6
SAMM50-204ENST00000493161 COQ7Q99807 217 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 NRIP3Q9NQ35 241 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 POLR1DQ9Y2S0 133 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 IER3IP1Q9Y5U9 82 aa11.32□□□□□ -0.6
SAMM50-204ENST00000493161 ADAM20O43506 726 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 IFNW1P05000 195 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 ACSM4P0C7M7 580 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 SDHAP31040 664 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 IFNA8P32881 189 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 CD200P41217 278 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 ARF6P62330 175 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 PRB3Q04118 309 aaPredicted RBP11.31□□□□□ -0.6
SAMM50-204ENST00000493161 POU4F2Q12837 409 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 CFAP77Q6ZQR2 320 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 LINC00346Q8IVM7 164 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 ZSCAN4Q8NAM6 433 aaPredicted RBP11.31□□□□□ -0.6
SAMM50-204ENST00000493161 GJC3Q8NFK1 279 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 OR2T12Q8NG77 320 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 OR11L1Q8NGX0 322 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 SLCO4A1Q96BD0 722 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 ATP6V1G3Q96LB4 118 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 HCAR1Q9BXC0 346 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 TRIM15Q9C019 465 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 HDHD2Q9H0R4 259 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 SEMA6AQ9H2E6 1030 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 ERVK-18Q9QC07 812 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 SIGLEC7Q9Y286 467 aa11.31□□□□□ -0.6
SAMM50-204ENST00000493161 IGLV1-36A0A0B4J1U3 117 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 ELOVL7A1L3X0 281 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 C5orf63A6NC05 138 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 F5H5K5 113 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 LGALS8O00214 317 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 EDF1O60869 148 aaKnown RBP11.3□□□□□ -0.6
SAMM50-204ENST00000493161 NDUFB2O95178 105 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 GYPAP02724 150 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 PRB2P02812 416 aaPredicted RBP11.3□□□□□ -0.6
SAMM50-204ENST00000493161 CA6P23280 308 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 NPY4RP50391 375 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 RPL15P61313 204 aaKnown RBP11.3□□□□□ -0.6
SAMM50-204ENST00000493161 ELF3P78545 371 aaPredicted RBP11.3□□□□□ -0.6
SAMM50-204ENST00000493161 SF3A3Q12874 501 aaKnown RBP eCLIP11.3□□□□□ -0.6
SAMM50-204ENST00000493161 COX10Q12887 443 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 OR8B8Q15620 311 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 METTL11BQ5VVY1 283 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 CD276Q5ZPR3 534 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 ZNF826PQ6ZT77 177 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 LDLRAD3Q86YD5 345 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 CELF2-AS1Q8N7Q2 184 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 SCCPDHQ8NBX0 429 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 SLC7A13Q8TCU3 470 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 ERGIC1Q969X5 290 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 INTS9Q9NV88 658 aaKnown RBP11.3□□□□□ -0.6
SAMM50-204ENST00000493161 CMTM6Q9NX76 183 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 KIF17Q9P2E2 1029 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 RNF7Q9UBF6 113 aa11.3□□□□□ -0.6
SAMM50-204ENST00000493161 LOC100653049A0A140TA62 436 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 A0A1B0GW55 424 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 G3V4G9 280 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 OR10H3O60404 316 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 KRT34O76011 436 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 ZNF682O95780 498 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 LIPFP07098 398 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 DUX4L2P0CJ85 424 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 DUX4L3P0CJ86 424 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 DUX4L4P0CJ87 422 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 DUX4L5P0CJ88 424 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 DUX4L6P0CJ89 424 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 DUX4L7P0CJ90 424 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 KLF10Q13118 480 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 OR8G1Q15617 311 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 FBLN7Q53RD9 439 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 METTL21CQ5VZV1 264 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 GPR139Q6DWJ6 353 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 SLC18B1Q6NT16 456 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 DUX4L9Q6RFH8 374 aaPredicted RBP11.29□□□□□ -0.6
SAMM50-204ENST00000493161 BTN2A1Q7KYR7 527 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 OR6V1Q8N148 313 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 LZICQ8WZA0 190 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 GPX7Q96SL4 187 aaPredicted RBP11.29□□□□□ -0.6
SAMM50-204ENST00000493161 TMEM120AQ9BXJ8 343 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 C16orf95Q9H693 158 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 SRA1Q9HD15 236 aaKnown RBP11.29□□□□□ -0.6
SAMM50-204ENST00000493161 PNRC2Q9NPJ4 139 aaKnown RBP11.29□□□□□ -0.6
SAMM50-204ENST00000493161 DUX4Q9UBX2 424 aa11.29□□□□□ -0.6
SAMM50-204ENST00000493161 IGHV3OR15-7A0A075B7D8 119 aa11.28□□□□□ -0.6
SAMM50-204ENST00000493161 ZNF816-ZNF321PA0A0X1KG74 233 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms