RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SPI1P17947 270 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 GSTT1P30711 240 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 GRK5P34947 590 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 SLC25A1P53007 311 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 GRB2P62993 217 aaKnown RBP7.74□□□□□ -1.17
HDAC6-232ENST00000489053 HIST1H3AP68431 136 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 MZT1Q08AG7 82 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 OR8G1Q15617 311 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 KLHL12Q53G59 568 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 HIST2H3PS2Q5TEC6 136 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 DCAF12L2Q5VW00 463 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 ZNF770Q6IQ21 691 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-232ENST00000489053 FBXW12Q6X9E4 464 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 HIST2H3AQ71DI3 136 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 SPATC1Q76KD6 591 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 CXXC5Q7LFL8 322 aaKnown RBP7.74□□□□□ -1.17
HDAC6-232ENST00000489053 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-232ENST00000489053 ERI1Q8IV48 349 aaKnown RBP7.74□□□□□ -1.17
HDAC6-232ENST00000489053 MUC20Q8N307 709 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-232ENST00000489053 IQCF1Q8N6M8 205 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 ZNF283Q8N7M2 679 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 OR8D4Q8NGM9 314 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 ITLN1Q8WWA0 313 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 SLCO4A1Q96BD0 722 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 SLAMF6Q96DU3 332 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 INTS14Q96SY0 518 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 SOX7Q9BT81 388 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 SLC22A4Q9H015 551 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 OR51V1Q9H2C8 321 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 CMC2Q9NRP2 79 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 TMEM106BQ9NUM4 274 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 DNAJB9Q9UBS3 223 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 METRNQ9UJH8 293 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 NPTNQ9Y639 398 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 FBN1P35555 2871 aaKnown RBP7.74□□□□□ -1.17
HDAC6-232ENST00000489053 CR1P17927 2039 aa7.74□□□□□ -1.17
HDAC6-232ENST00000489053 FAM157AC9JC47 383 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 ZNF878C9JN71 531 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 ACOT8O14734 319 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 WNT9BO14905 357 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 TCF21O43680 179 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 FKBP6O75344 327 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 FOXH1O75593 365 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 IGHV2-5P01817 119 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 GATA3P23771 443 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 MDH2P40926 338 aaKnown RBP7.73□□□□□ -1.17
HDAC6-232ENST00000489053 ERFP50548 548 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 PRKXP51817 358 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 BTG1P62324 171 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 EIF2B1Q14232 305 aaKnown RBP7.73□□□□□ -1.17
HDAC6-232ENST00000489053 GK2Q14410 553 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-232ENST00000489053 GINS1Q14691 196 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 TIGD6Q17RP2 521 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 GFOD2Q3B7J2 385 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 ESCO2Q56NI9 601 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 C1orf146Q5VVC0 180 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 DRAM2Q6UX65 266 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 CD300LDQ6UXZ3 194 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 SHFQ7M4L6 423 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 NLRC3Q7RTR2 1065 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 FTMTQ8N4E7 242 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 ZNF511Q8NB15 262 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 OR6N2Q8NGY6 317 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 DNAJC9Q8WXX5 260 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 NIPSNAP1Q9BPW8 284 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 C1QTNF5Q9BXJ0 243 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 OPA3Q9H6K4 179 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 METTL17Q9H7H0 456 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-232ENST00000489053 MRPL22Q9NWU5 206 aaKnown RBP7.73□□□□□ -1.17
HDAC6-232ENST00000489053 VNN3Q9NY84 501 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 OR5V1Q9UGF6 321 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 ENOPH1Q9UHY7 261 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 POMPQ9Y244 141 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 COMMD3-BMI1R4GMX3 469 aa7.73□□□□□ -1.17
HDAC6-232ENST00000489053 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.73□□□□□ -1.17
HDAC6-232ENST00000489053 CHD3Q12873 2000 aaKnown RBP7.73□□□□□ -1.17
HDAC6-232ENST00000489053 IGHV3-64DA0A0J9YX35 117 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 FAM183AA6NL82 134 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 ANKRD30BLA7E2S9 258 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 IQCF6A8MYZ5 107 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 F5H5P2 479 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 J3QLI3 93 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 XRCC2O43543 280 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 PLPP2O43688 288 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 GLCEO94923 617 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 H2BFMP0C1H6 154 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 OSMP13725 252 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 RPS2P15880 293 aaKnown RBP7.72□□□□□ -1.17
HDAC6-232ENST00000489053 CFL1P23528 166 aaKnown RBP7.72□□□□□ -1.17
HDAC6-232ENST00000489053 THBS2P35442 1172 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 GNALP38405 381 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 RPS27P42677 84 aaKnown RBP7.72□□□□□ -1.17
HDAC6-232ENST00000489053 CX3CR1P49238 355 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 LMO4P61968 165 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 LCN2P80188 198 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 DBPQ10586 325 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-232ENST00000489053 KCNJ8Q15842 424 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 SNCBQ16143 134 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 SNAPC1Q16533 368 aa7.72□□□□□ -1.17
HDAC6-232ENST00000489053 LCN1P1Q5VSP4 162 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms