RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MARVELD1Q9BSK0 173 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 SAMD10Q9BYL1 202 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 GCOM2Q9BZD3 368 aaPredicted RBP0.54□□□□□ -2.32
CCDC93-209ENST00000488908 TOLLIPQ9H0E2 274 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 LINC00574Q9H8X3 128 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 LIN28AQ9H9Z2 209 aaKnown RBP0.54□□□□□ -2.32
CCDC93-209ENST00000488908 TMEM9BQ9NQ34 198 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 ZNF492Q9P255 531 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 CACNA1GO43497 2377 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 IGKV1-8A0A0C4DH67 115 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 FAM240BA0A1B0GVZ2 78 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 BTBD17A6NE02 478 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 C3orf84H3BNL1 204 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 H7C417 338 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 FKBP6O75344 327 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 FSTL3O95633 263 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 MT-ND4P03905 459 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 CT45A6P0DMU7 189 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 CT45A5P0DMU8 189 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 CT45A7P0DMV0 189 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 CBR1P16152 277 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 MPIP34949 423 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 ACOT2P49753 483 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 POLR2FP61218 127 aaKnown RBP0.53□□□□□ -2.32
CCDC93-209ENST00000488908 RPS23P62266 143 aaKnown RBP0.53□□□□□ -2.32
CCDC93-209ENST00000488908 TPBGQ13641 420 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 GK3PQ14409 553 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 CHRNA6Q15825 494 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 ZNF726P1Q15940 193 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 SLC25A35Q3KQZ1 300 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 VPS26BQ4G0F5 336 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 CT45A1Q5HYN5 189 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 CTSL3PQ5NE16 218 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 PMF1Q6P1K2 205 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 KDELC1Q6UW63 502 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 CERS6Q6ZMG9 384 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 RUFY3Q7L099 469 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 MRPL55Q7Z7F7 128 aaKnown RBP0.53□□□□□ -2.32
CCDC93-209ENST00000488908 DAZ4Q86SG3 579 aaKnown RBP0.53□□□□□ -2.32
CCDC93-209ENST00000488908 MDP1Q86V88 176 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 FAM9BQ8IZU0 186 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 CBR4Q8N4T8 237 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 SDR9C7Q8NEX9 313 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 B3GNT7Q8NFL0 401 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 OR52N1Q8NH53 320 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 OR1L1Q8NH94 360 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 CT45A3Q8NHU0 189 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 SLC2A14Q8TDB8 520 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 YIPF5Q969M3 257 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 CSPG4P5Q96PW8 444 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 ILKAPQ9H0C8 392 aaPredicted RBP0.53□□□□□ -2.32
CCDC93-209ENST00000488908 MYOZ1Q9NP98 299 aaPredicted RBP0.53□□□□□ -2.32
CCDC93-209ENST00000488908 DAZ1Q9NQZ3 744 aaKnown RBP0.53□□□□□ -2.32
CCDC93-209ENST00000488908 UXTQ9UBK9 157 aaPredicted RBP0.53□□□□□ -2.32
CCDC93-209ENST00000488908 MTFP1Q9UDX5 166 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 LGALS13Q9UHV8 139 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 AKNAQ7Z591 1439 aa0.53□□□□□ -2.32
CCDC93-209ENST00000488908 FLG2Q5D862 2391 aaPredicted RBP0.52□□□□□ -2.33
CCDC93-209ENST00000488908 IGLV10-54A0A075B6I4 117 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 A0A0J9YXV3 536 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 SYCE1LA8MT33 242 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 A8MWL6 223 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.52□□□□□ -2.33
CCDC93-209ENST00000488908 C15orf65H3BRN8 121 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 AQP9O43315 295 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 RAD51CO43502 376 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 SYNGR2O43760 224 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 CCDC22O60826 627 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 ARG1P05089 322 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 SERPINA5P05154 406 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 MX1P20591 662 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 HTR1DP28221 377 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 PCK1P35558 622 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 PRPHP41219 470 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 NSG1P42857 185 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 TNNT2P45379 298 aaPredicted RBP0.52□□□□□ -2.33
CCDC93-209ENST00000488908 TAS2R43P59537 309 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 BPIFB3P59826 476 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 PLP1P60201 277 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 STXBP1P61764 594 aaKnown RBP0.52□□□□□ -2.33
CCDC93-209ENST00000488908 CYP24A1Q07973 514 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 BST2Q10589 180 aaKnown RBP0.52□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF141Q15928 474 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 LUZP6Q538Z0 58 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF470Q6ECI4 717 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 NPSR1Q6W5P4 371 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 RTL4Q6ZR62 310 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 ZFP41Q8N8Y5 198 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 UBAC2Q8NBM4 344 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 C11orf72Q8NBR9 251 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 BHLHE23Q8NDY6 225 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 C19orf18Q8NEA5 215 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 OR52E2Q8NGJ4 325 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 OR6Q1Q8NGQ2 317 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 ENKURQ8TC29 256 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 APH1BQ8WW43 257 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 RSPH1Q8WYR4 309 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 TRIM44Q96DX7 344 aaPredicted RBP0.52□□□□□ -2.33
CCDC93-209ENST00000488908 RNF145Q96MT1 663 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 C18orf15Q96N68 181 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms